{"id":"W2047330984","doi":"10.1371/journal.pone.0114773","title":"Copy Number of the Transposon, Pokey, in rDNA Is Positively Correlated with rDNA Copy Number in Daphnia obtusa","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":12,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; University of Guelph","keywords":"Biology; Daphnia pulex; Ribosomal RNA; Genetics; Transposable element; Ribosomal DNA; Population; Locus (genetics); Gene; 28S ribosomal RNA; Daphnia; RNA; Genome; Phylogenetics; Zoology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009006791,0.0002023348,0.0002237553,0.0006154012,0.0000941309,0.0003596012,0.0001339569,0.000214417,0.0005499932],"category_scores_gemma":[0.0003688594,0.0003039467,0.0001206054,0.0003024655,0.0002447312,0.0001970416,0.0002678906,0.0003491256,0.0002219607],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002814391,"about_ca_system_score_gemma":0.00008338274,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001297202,"about_ca_topic_score_gemma":0.001863851,"domain_scores_codex":[0.9998436,0.000007940895,0.00001492162,0.00007878485,0.00003462115,0.00002021081],"domain_scores_gemma":[0.9994946,0.00011798,0.0002141437,0.00003857262,0.00005896888,0.0000757353],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00007909341,0.00001302153,0.02553576,0.00002826199,0.00001210398,0.00003732073,0.00005985083,0.00009563934,0.9725577,0.00002157947,0.00002333301,0.00153637],"study_design_scores_gemma":[0.000009621273,0.0002250064,0.8698231,0.000008132766,0.00003669585,0.0003632054,0.0002021631,0.001004104,0.1273883,0.00005515817,0.0008683766,0.00001603927],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9988027,0.0001713162,0.0003099812,0.000009032704,0.000002656773,0.000003236968,0.0003861262,0.00002211562,0.0002929281],"genre_scores_gemma":[0.9978001,0.00009981492,0.0004640234,0.00001659082,0.000002175462,0.000009372152,0.0007999255,0.000008528642,0.0007995251],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001297202,"threshold_uncertainty_score":0.002579272,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01626891299385591,"score_gpt":0.1948503868953224,"score_spread":0.1785814739014665,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}