{"id":"W2047596856","doi":"10.1139/g08-092","title":"The effect of transposon<i>Pokey</i>insertions on sequence variation in the 28S rRNA gene of<i>Daphnia pulex</i>","year":2008,"lang":"en","type":"article","venue":"Genome","topic":"Evolution and Genetic Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":13,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Daphnia pulex; Genetics; Transposable element; Gene; Ribosomal RNA; Concerted evolution; Obligate; 28S ribosomal RNA; RNA; Genome; Daphnia; Zoology; Botany","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003221553,0.0003197259,0.0002596616,0.0003224316,0.0001310569,0.0003796581,0.0001862368,0.0002348184,0.0005132493],"category_scores_gemma":[0.0007934115,0.0002267128,0.0001738812,0.0001932544,0.0003510199,0.0002576038,0.0003691069,0.0004336175,0.00009307668],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003191336,"about_ca_system_score_gemma":0.000156571,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007505621,"about_ca_topic_score_gemma":0.00163967,"domain_scores_codex":[0.9995407,0.0001230016,0.00003587494,0.000149204,0.00008774165,0.00006358296],"domain_scores_gemma":[0.9991067,0.0004617595,0.0002302489,0.00006807929,0.00004176725,0.0000913909],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0001300041,0.00001967058,0.007839289,0.00002037483,0.0000182191,0.00004650441,0.00004564175,0.0000762368,0.9900802,0.000017627,0.000005079596,0.001701229],"study_design_scores_gemma":[0.0000136686,0.001261812,0.5885032,0.000008786236,0.00009752362,0.0006320063,0.0002321653,0.001181442,0.4072895,0.00005343038,0.0007044156,0.00002204657],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994884,0.00008811858,0.0002448402,0.000006992203,0.000001465933,0.00000267106,0.00003355768,0.00000680791,0.0001271411],"genre_scores_gemma":[0.9990414,0.00008593059,0.0005388902,0.00001972351,0.000002241998,0.000005636763,0.0001445147,0.000009277654,0.0001523879],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0007505621,"threshold_uncertainty_score":0.002315521,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.008214194250603758,"score_gpt":0.2272982697576958,"score_spread":0.219084075507092,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}