{"id":"W2047947935","doi":"10.3791/3678","title":"Investigating Intestinal Inflammation in DSS-induced Model of IBD","year":2012,"lang":"en","type":"article","venue":"Journal of Visualized Experiments","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":598,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Canadian Institutes of Health Research","keywords":"Inflammatory bowel disease; Colitis; Ulcerative colitis; Medicine; Myeloperoxidase; Inflammation; Diarrhea; Gastroenterology; Immunology; Pathogenesis; H&E stain; Pathology; Disease; Internal medicine; Immunohistochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0005018394,0.0001224819,0.0001826619,0.00011857,0.00002317775,0.000009463297,0.0001488935,0.0000878982,0.00001171316],"category_scores_gemma":[0.0003524395,0.0001167997,0.00009299065,0.00006680156,0.00003819004,0.0000330321,0.00006678422,0.0001021748,0.000002331736],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00004257347,"about_ca_system_score_gemma":0.0001454651,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000003802683,"about_ca_topic_score_gemma":0.000001033061,"domain_scores_codex":[0.9987135,0.0001142019,0.000640913,0.00008637916,0.0002428397,0.0002021933],"domain_scores_gemma":[0.9989769,0.000009468469,0.0005652391,0.0001358675,0.0001602485,0.0001522109],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001844838,0.0001246005,0.03574962,0.00002289548,0.00002881262,0.000004187481,0.0007571229,0.000374843,0.9623727,0.0001166133,0.00005451937,0.0002095848],"study_design_scores_gemma":[0.001622708,0.0001192387,0.0162546,0.0001007862,0.00001465561,0.00001613257,0.0002767699,0.001886552,0.9794725,0.00008474346,0.00003010497,0.0001212524],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9984937,0.0001826404,0.0008139664,0.00001141344,0.0001292001,0.00009792001,0.000001391225,0.000002686587,0.0002670619],"genre_scores_gemma":[0.9942018,0.000008803131,0.005472013,0.00005219808,0.0002169655,0.00000619396,0.000006144622,0.00001731184,0.00001857317],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01949502,"threshold_uncertainty_score":0.4762953,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04274882733138081,"score_gpt":0.3938748346386667,"score_spread":0.3511260073072859,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}