{"id":"W2048204775","doi":"10.1186/1471-2164-7-167","title":"Molecular signatures (unique proteins and conserved indels) that are specific for the epsilon proteobacteria (Campylobacterales)","year":2006,"lang":"en","type":"review","venue":"BMC Genomics","topic":"Salmonella and Campylobacter epidemiology","field":"Agricultural and Biological Sciences","cited_by":53,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Joint Genome Institute; U.S. Department of Energy","keywords":"Biology; Proteobacteria; Campylobacter; Genetics; Campylobacter jejuni; RNA polymerase; Ribosomal RNA; Gene; RNA; Bacteria; 16S ribosomal RNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006488529,0.0006829646,0.00150141,0.00003019216,0.0003067723,0.0001976105,0.0007829178,0.0008532231,0.00003319012],"category_scores_gemma":[0.00008044041,0.0002408209,0.000659065,0.0001778639,0.0001933043,0.00006309481,0.000224968,0.0004481574,0.00001381667],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00009663833,"about_ca_system_score_gemma":0.00006568413,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001322404,"about_ca_topic_score_gemma":0.0008784644,"domain_scores_codex":[0.9971307,0.0005858635,0.0006530183,0.0008905838,0.0001354387,0.0006044119],"domain_scores_gemma":[0.9973863,0.001275032,0.0008364635,0.0002937535,0.00007833755,0.0001301558],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001391761,0.0001430325,0.0009059686,0.005078758,0.0002668147,0.00002234392,0.00005201266,0.000009366135,0.007382934,0.001240059,0.002538527,0.982221],"study_design_scores_gemma":[0.0001374457,0.0001161273,0.004572178,0.0006969095,0.0002059771,0.00004751939,0.00004955141,0.000009152423,0.00008033001,0.0007571993,0.9927505,0.0005770597],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.05075102,0.9424177,0.00009421626,0.0002796188,0.000249368,0.005529265,0.0005582809,0.000073734,0.00004680319],"genre_scores_gemma":[0.001098981,0.9949954,0.001022378,0.0002105359,0.0005308599,0.00127316,0.0007059223,0.00001516663,0.0001475565],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.990212,"threshold_uncertainty_score":0.9820393,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1084910422367366,"score_gpt":0.28034312823961,"score_spread":0.1718520860028734,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}