{"id":"W2049573711","doi":"10.1111/j.1574-695x.2009.00645.x","title":"Autoactivation of the AggR regulator of enteroaggregative<i>Escherichia coli in vitro</i>and<i>in vivo</i>","year":2009,"lang":"en","type":"article","venue":"FEMS Immunology & Medical Microbiology","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Crohn's and Colitis Foundation of Canada; Crohn's and Colitis Foundation","keywords":"Enteroaggregative Escherichia coli; Biology; Fimbria; DNA footprinting; Regulator; Primer extension; Virulence; Microbiology; Escherichia coli; Plasmid; Response regulator; Transcriptional regulation; Luciferase; Molecular biology; Promoter; Genetics; Gene; Enterobacteriaceae; Gene expression; Nucleotide; Transfection; Mutant","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000184127,0.0003754628,0.0001902968,0.000140546,0.00007873998,0.000311387,0.0001162967,0.0001797981,0.000744512],"category_scores_gemma":[0.000186316,0.000121646,0.0002644791,0.00008866389,0.0001992437,0.00008117304,0.0002242801,0.0004975591,0.0005308978],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002776675,"about_ca_system_score_gemma":0.0001577618,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0004579341,"about_ca_topic_score_gemma":0.0005026698,"domain_scores_codex":[0.9996978,0.0000922114,0.00002285429,0.00005706741,0.00006555108,0.00006450896],"domain_scores_gemma":[0.9997978,0.00005235455,0.00005923604,0.00003538205,0.00002487162,0.00003040273],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002914025,0.00001044642,0.0001130808,0.00001020722,0.000001399331,0.00001728704,0.000005253078,0.00001815984,0.9994469,0.0000229915,0.00001480252,0.0003102356],"study_design_scores_gemma":[0.000003302624,0.000136857,0.005909675,0.000004370258,0.000006963302,0.0001901899,0.00002943507,0.000730596,0.9920763,0.00002172734,0.0008864222,0.000004133954],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9916363,0.0009989082,0.005273003,0.00009708531,0.0000288533,0.00002171474,0.0003409187,0.0001265065,0.001476724],"genre_scores_gemma":[0.9925681,0.0004298758,0.003775032,0.0001202624,0.00001335546,0.0000297949,0.0009540601,0.00005355564,0.002055889],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.000744512,"threshold_uncertainty_score":0.002490699,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005535061424848674,"score_gpt":0.2398008406666449,"score_spread":0.2342657792417963,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}