{"id":"W2049915602","doi":"10.1002/prca.201400019","title":"Quality evaluation of LC‐MS/MS‐based <i>E. coli</i> H antigen typing (MS‐H) through label‐free quantitative data analysis in a clinical sample setup","year":2014,"lang":"en","type":"article","venue":"PROTEOMICS - CLINICAL APPLICATIONS","topic":"Escherichia coli research studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":9,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Manitoba; Public Health Agency of Canada","funders":"","keywords":"Typing; Escherichia coli; Chromatography; Biology; Chemistry; Microbiology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaresearch"],"consensus_categories":[],"category_scores_codex":[0.01390719,0.0002102436,0.0007049248,0.00008424449,0.0001569551,0.00002980447,0.001200067,0.0003104239,0.00002363911],"category_scores_gemma":[0.01745311,0.00020769,0.0002598595,0.0009412429,0.0005686349,0.00002022088,0.0008922933,0.0004017745,0.00001175214],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003737487,"about_ca_system_score_gemma":0.0005288136,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0006192323,"about_ca_topic_score_gemma":0.0028378,"domain_scores_codex":[0.9942839,0.002023907,0.001780951,0.001084279,0.000492187,0.0003347743],"domain_scores_gemma":[0.9937683,0.001985848,0.0007098535,0.002569206,0.000841341,0.0001253957],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.001260747,0.005409247,0.896805,0.0002589975,0.002859026,2.916361e-7,0.0001396505,0.001808678,0.05290059,0.01867052,0.002949447,0.01693774],"study_design_scores_gemma":[0.007781742,0.001012617,0.6856804,0.00005964451,0.001192844,3.247013e-7,0.0001840174,0.2374067,0.004858658,0.02541217,0.03549358,0.0009173393],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.5925351,0.0002853775,0.4023279,0.001054764,0.00003480494,0.002143883,0.0008872059,0.000019623,0.0007113203],"genre_scores_gemma":[0.7460755,0.0007400551,0.249208,0.0005930014,0.0002257683,0.001031017,0.002085748,0.00002859494,0.00001235893],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.235598,"threshold_uncertainty_score":0.9908233,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.3049815656483502,"score_gpt":0.5311308439406458,"score_spread":0.2261492782922956,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}