{"id":"W2049919198","doi":"10.1007/s10930-008-9129-0","title":"On the Relation Between the Predicted Secondary Structure and the Protein Size","year":2008,"lang":"en","type":"article","venue":"The Protein Journal","topic":"Protein Structure and Dynamics","field":"Biochemistry, Genetics and Molecular Biology","cited_by":8,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Alberta","funders":"","keywords":"Protein secondary structure; Protein structure; Protein structure prediction; Protein tertiary structure; Function (biology); BETA (programming language); Alpha (finance); Structure function; Chemistry; Biological system; Mathematics; Physics; Biology; Statistics; Computer science; Biochemistry; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["sts"],"consensus_categories":[],"category_scores_codex":[0.0008429773,0.0002018483,0.0001487817,0.00001480429,0.001446517,0.0000907053,0.0005853791,0.0001644005,0.00005514564],"category_scores_gemma":[0.0005327231,0.00007153932,0.0001061738,0.0001030253,0.0006838441,0.000009137018,0.0001533896,0.001053833,0.000002012304],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001430986,"about_ca_system_score_gemma":0.0001373674,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000010372,"about_ca_topic_score_gemma":0.000007099753,"domain_scores_codex":[0.9983696,0.0006119168,0.0002756207,0.0001899648,0.0003028948,0.0002500131],"domain_scores_gemma":[0.9989149,0.0001498664,0.0002612854,0.0005289491,0.00008738597,0.00005758706],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.006888878,0.0001002241,0.005247115,0.0001018482,0.002324282,0.00006818909,0.00740121,0.0008438331,0.8631809,0.05075208,0.01026035,0.05283111],"study_design_scores_gemma":[0.009743369,0.001833868,0.1948037,0.0002801244,0.0003538178,0.002924566,0.0006248263,0.0008417619,0.2922219,0.4666412,0.02859974,0.001131044],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9841811,0.001142615,0.00105053,0.01140167,0.00007116693,0.001500993,0.00004113005,0.0000105227,0.0006002829],"genre_scores_gemma":[0.9974862,0.0000882095,0.0002237401,0.0007440185,0.0008372186,0.00006446363,0.00001179758,0.00002263572,0.0005217647],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.570959,"threshold_uncertainty_score":0.9998535,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005337289902904936,"score_gpt":0.1979154353893874,"score_spread":0.1925781454864824,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}