{"id":"W2050047092","doi":"10.1016/j.jprot.2008.06.004","title":"A proteomics approach to identify proteins differentially expressed in Douglas-fir seedlings infected by Phellinus sulphurascens","year":2008,"lang":"en","type":"article","venue":"Journal of Proteomics","topic":"Fungal Biology and Applications","field":"Medicine","cited_by":19,"is_retracted":false,"has_abstract":false,"ca_institutions":"Natural Resources Canada; Canadian Forest Service","funders":"Canadian Forest Service; Natural Resources Canada","keywords":"Proteomics; Douglas fir; Biology; Botany; Computational biology; Biochemistry; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000445662,0.0002705133,0.0006487985,0.0002988644,0.0001358905,0.00002816823,0.0003163525,0.0003220719,0.00001619778],"category_scores_gemma":[0.0003574337,0.0002227387,0.0001972799,0.0004833389,0.0001307046,0.0001476526,0.00007548952,0.001020255,0.00002749859],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001707598,"about_ca_system_score_gemma":0.0003478312,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00003290445,"about_ca_topic_score_gemma":0.000004639101,"domain_scores_codex":[0.9979048,0.0001004187,0.0009572333,0.0003110897,0.0003344595,0.0003919425],"domain_scores_gemma":[0.9984612,0.00005609658,0.000522531,0.0003355701,0.0003721903,0.0002524367],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001004981,0.001278792,0.01260814,0.00008630798,0.00008640373,0.00004607539,0.000770161,0.0001027497,0.9819043,0.00007816539,0.001932856,0.0001010711],"study_design_scores_gemma":[0.01002647,0.001785626,0.1258905,0.000553693,0.000193904,0.001869335,0.0001861043,0.0008189035,0.8533053,0.0008785372,0.003771247,0.000720383],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9662464,0.00009512845,0.0289992,0.0012029,0.0001295153,0.003016437,0.00003435117,0.00003334103,0.0002426769],"genre_scores_gemma":[0.9182928,0.0001719434,0.08012404,0.0003308087,0.000409575,0.0002731302,0.00003544917,0.0000408013,0.0003215138],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.128599,"threshold_uncertainty_score":0.9083019,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02204574422720717,"score_gpt":0.2804788619229223,"score_spread":0.2584331176957151,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}