{"id":"W2050209782","doi":"10.1038/ismej.2008.55","title":"Distantly sampled soils carry few species in common","year":2008,"lang":"en","type":"article","venue":"The ISME Journal","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":187,"is_retracted":false,"has_abstract":true,"ca_institutions":"The Scarborough Hospital; University of Toronto","funders":"","keywords":"Biology; Phylum; Soil water; Taxonomic rank; Phylogenetic tree; Jaccard index; Community structure; Soil microbiology; Ecology; Subsoil; Botany; Taxon; Bacteria; Statistics; Mathematics; Paleontology; Genetics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003982197,0.0003312518,0.000528253,0.002033459,0.000870717,0.0009254664,0.0002950069,0.0004567099,0.001098555],"category_scores_gemma":[0.00127897,0.0002903368,0.0002322048,0.001544301,0.0007731498,0.0004248216,0.0009735595,0.0002483866,0.0004195773],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002378912,"about_ca_system_score_gemma":0.000277469,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002567902,"about_ca_topic_score_gemma":0.006643061,"domain_scores_codex":[0.9992632,0.00006146326,0.00008689865,0.0003100686,0.0001772744,0.0001010829],"domain_scores_gemma":[0.9985703,0.0003637562,0.0004912248,0.000157454,0.0002287097,0.0001885514],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0004555894,0.00009944821,0.6779847,0.0002768667,0.0002502048,0.0003845087,0.001954474,0.0002028084,0.2955872,0.0001782742,0.0001057113,0.02252023],"study_design_scores_gemma":[0.000006687418,0.0001026446,0.9880383,0.00001041269,0.00005483889,0.0006964341,0.00102691,0.0001973119,0.008587388,0.0002163929,0.00105101,0.00001161028],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9983108,0.0001728717,0.0006351019,0.00001157179,0.000003266564,0.000009582845,0.0002055143,0.00001687601,0.0006344411],"genre_scores_gemma":[0.9979421,0.00009681106,0.0009816064,0.00003038806,0.000004226586,0.00001459081,0.000620692,0.000007964094,0.0003014582],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002567902,"threshold_uncertainty_score":0.005105853,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02604985544546881,"score_gpt":0.2408245422584561,"score_spread":0.2147746868129873,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}