{"id":"W2050229506","doi":"10.4161/rna.26996","title":"Sequence, structure, and stacking","year":2013,"lang":"en","type":"review","venue":"RNA Biology","topic":"RNA and protein synthesis mechanisms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":15,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of General Medical Sciences; Canadian Institutes of Health Research; National Institutes of Health","keywords":"Riboswitch; Aminoacylation; Transfer RNA; Biology; T arm; Nucleic acid structure; Genetics; RNA; Computational biology; Non-coding RNA; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001226185,0.0003708462,0.0007925072,0.00007439092,0.00006831611,0.00003011958,0.0002904516,0.0008841483,0.0001338807],"category_scores_gemma":[0.00006949154,0.0002704777,0.0001639528,0.0000622462,0.0001160374,0.000001952409,0.0002069079,0.0001620801,0.00003888149],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001199165,"about_ca_system_score_gemma":0.0001068583,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001581437,"about_ca_topic_score_gemma":0.000003589337,"domain_scores_codex":[0.9985099,0.0002351159,0.0003172853,0.0005741801,0.00004527979,0.0003182054],"domain_scores_gemma":[0.9991993,0.00003160958,0.0002291178,0.0004149077,0.00003564044,0.0000893849],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.000001814734,0.0000033638,0.000002932279,0.0007952222,0.0001009089,0.00000176242,0.000002000481,2.075478e-8,0.03842266,0.0006631959,0.0002174102,0.9597887],"study_design_scores_gemma":[0.00005966586,0.0001298472,4.428722e-7,0.000382766,0.00009402171,0.00008277479,0.000001885014,2.848641e-7,0.004450747,0.0008219389,0.9936547,0.0003209321],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0003987167,0.9979804,0.0002035294,0.000007811915,0.0002843077,0.0004837309,0.0001506179,0.00001376977,0.0004771247],"genre_scores_gemma":[0.000327795,0.9967321,0.001285515,0.00007385798,0.0004280396,0.00007685367,0.0004872855,0.00004789575,0.0005406886],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9934373,"threshold_uncertainty_score":0.9999747,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05165735158556066,"score_gpt":0.3294174865917833,"score_spread":0.2777601350062226,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}