{"id":"W2050422759","doi":"10.3791/4046","title":"Single Oocyte Bisulfite Mutagenesis","year":2012,"lang":"en","type":"article","venue":"Journal of Visualized Experiments","topic":"Epigenetics and DNA Methylation","field":"Biochemistry, Genetics and Molecular Biology","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"Children’s Health Research Institute; Western University","funders":"Canadian Institutes of Health Research","keywords":"DNA methylation; Biology; Bisulfite; Bisulfite sequencing; Epigenetics; Epigenomics; Genetics; Methylated DNA immunoprecipitation; Genomic imprinting; Molecular biology; Illumina Methylation Assay; Chromatin; DNA demethylation; DNA; Gene; Gene expression","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003530971,0.0001197713,0.0001674565,0.00007729476,0.00004814359,0.00002292397,0.0001277433,0.00009778762,0.00005733081],"category_scores_gemma":[0.00007436606,0.0001044,0.0001414107,0.00007180212,0.00002690659,0.00001263719,0.00005280614,0.0000499347,0.0000108587],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002641621,"about_ca_system_score_gemma":0.00002974506,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000002528629,"about_ca_topic_score_gemma":2.320116e-7,"domain_scores_codex":[0.9989906,0.00009084565,0.0003702875,0.00009524064,0.0002265223,0.0002265218],"domain_scores_gemma":[0.9992316,0.000009703479,0.0003081718,0.0001554986,0.0001261298,0.0001688609],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001824887,0.0002850806,0.004156357,0.000003738378,0.00007179404,0.000001675928,0.0001864479,0.000008224181,0.992447,0.00001286993,0.0003162324,0.002328125],"study_design_scores_gemma":[0.0008446417,0.0003667545,0.002488806,0.00001056987,0.00002177368,0.00001279513,0.0000934726,0.000004026301,0.9255385,0.00001631446,0.07048951,0.0001128758],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9791636,0.01495485,0.004384211,0.00001814052,0.0006091995,0.00005887573,0.000001922539,0.000003350145,0.000805858],"genre_scores_gemma":[0.9942421,0.0004417422,0.004172682,0.00009448348,0.0007153751,0.000002634419,0.000009285085,0.0000236442,0.0002980591],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.07017328,"threshold_uncertainty_score":0.4257308,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03917398278655933,"score_gpt":0.4141652001844566,"score_spread":0.3749912173978973,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}