{"id":"W2050689083","doi":"10.1139/g07-051","title":"Different patterns of genealogical relationships found in the two major QTLs causing reduction of seed shattering during rice domestication","year":2007,"lang":"en","type":"article","venue":"Genome","topic":"Genetic Mapping and Diversity in Plants and Animals","field":"Biochemistry, Genetics and Molecular Biology","cited_by":73,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"Biology; Subspecies; Domestication; Quantitative trait locus; Allele; Locus (genetics); Japonica; Epistasis; Genetics; Oryza sativa; Phylogenetic tree; Genetic diversity; Evolutionary biology; Gene; Botany; Population; Zoology","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002985257,0.00006590869,0.00008664607,0.00005164104,0.00007017416,0.000007969397,0.00008129386,0.00005132928,0.00000474972],"category_scores_gemma":[0.00002575746,0.00005173543,0.00003123743,0.00006810693,0.00002574551,0.000002271606,0.00004339181,0.00005946237,7.398294e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000009927766,"about_ca_system_score_gemma":0.000009116158,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00006455193,"about_ca_topic_score_gemma":0.0000212447,"domain_scores_codex":[0.9994085,0.00004703616,0.0002003754,0.0001342641,0.00009150207,0.0001183413],"domain_scores_gemma":[0.9996902,0.00001842826,0.00009509317,0.0001379854,0.0000365896,0.0000217426],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00003654794,0.00004136653,0.04901256,0.00004922677,0.00001147415,0.000002301692,0.0004182242,0.0004045784,0.9499538,0.0000370008,8.314453e-7,0.00003208867],"study_design_scores_gemma":[0.0003057355,0.00005018309,0.9659449,0.00001936461,0.00001273243,0.00002916587,0.0007236746,0.00001230709,0.03276465,0.00003805413,0.00003595284,0.00006328471],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9950998,0.0001648754,0.004316477,0.00003911991,0.00004438437,0.00009720417,0.00001326646,0.000002540103,0.0002223585],"genre_scores_gemma":[0.9995866,0.00002895616,0.0001984587,0.00001254648,0.00008616307,0.000001697193,0.00004595976,0.000003293677,0.00003635916],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.9171891,"threshold_uncertainty_score":0.210971,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02834445584319292,"score_gpt":0.2542654578799823,"score_spread":0.2259210020367894,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}