{"id":"W2051102111","doi":"10.1016/j.cell.2006.10.036","title":"Quantitative Proteomics Analysis of the Secretory Pathway","year":2006,"lang":"en","type":"article","venue":"Cell","topic":"Cellular transport and secretion","field":"Biochemistry, Genetics and Molecular Biology","cited_by":455,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université de Montréal; McGill University","funders":"","keywords":"COPI; Golgi apparatus; Biology; Proteome; Proteomics; Secretory protein; Secretory pathway; Cell biology; Secretion; Quantitative proteomics; Vesicle; Function (biology); Endoplasmic reticulum; Bioinformatics; Biochemistry; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004247745,0.0004236046,0.0004030733,0.0006043662,0.0003728722,0.0006948158,0.0004332406,0.0004499809,0.0008186389],"category_scores_gemma":[0.0004160445,0.0002218185,0.0003526376,0.0005722212,0.0002744188,0.0003698556,0.0002344993,0.0007197062,0.0004449002],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000760866,"about_ca_system_score_gemma":0.0004980488,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001225277,"about_ca_topic_score_gemma":0.001406904,"domain_scores_codex":[0.9996662,0.00004197774,0.0000145144,0.00008029286,0.0001570759,0.00003986911],"domain_scores_gemma":[0.9997635,0.00006064207,0.00002544933,0.0000267916,0.00009270298,0.00003073616],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00005430741,0.0000119385,0.0001351922,0.00003285792,0.000005940017,0.00001082653,0.000005206662,0.0000598004,0.9975689,0.0001244857,0.00006033366,0.001930087],"study_design_scores_gemma":[0.00001385237,0.00009121549,0.01235335,0.000005560054,0.00002869147,0.0002726424,0.0000266113,0.004566127,0.9792596,0.0003751206,0.002992665,0.00001446452],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9102228,0.00616908,0.07518295,0.0007224993,0.0001639127,0.00009731089,0.003701291,0.0005778619,0.003162185],"genre_scores_gemma":[0.9274598,0.003229361,0.0573349,0.0003896875,0.00007903147,0.0001104262,0.003739233,0.0001873677,0.007470073],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001225277,"threshold_uncertainty_score":0.005520523,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006889497037267642,"score_gpt":0.2013444329916003,"score_spread":0.1944549359543326,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}