{"id":"W2051525197","doi":"10.1016/j.gene.2009.06.020","title":"Endogenous retroviral LTRs as promoters for human genes: A critical assessment","year":2009,"lang":"en","type":"review","venue":"Gene","topic":"Chromosomal and Genetic Variations","field":"Agricultural and Biological Sciences","cited_by":318,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia; BC Cancer Agency","funders":"BC Cancer Agency; Canadian Institutes of Health Research","keywords":"Biology; Exaptation; Endogenous retrovirus; Long terminal repeat; Promoter; Gene; Genetics; Regulation of gene expression; Regulatory sequence; Transposable element; Gene expression; Function (biology); Genome","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001613409,0.00102927,0.001762328,0.00134429,0.0002431332,0.001310078,0.00137301,0.00140453,0.001469442],"category_scores_gemma":[0.001173643,0.0003930211,0.0004544935,0.001452804,0.0009803356,0.001561745,0.000606015,0.001985968,0.001186664],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0008694664,"about_ca_system_score_gemma":0.001114564,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0008622281,"about_ca_topic_score_gemma":0.001383724,"domain_scores_codex":[0.9997213,0.00005006102,0.00004093722,0.00007591419,0.0000861208,0.00002546882],"domain_scores_gemma":[0.9992188,0.0005054243,0.00006325874,0.00003229582,0.000148448,0.00003179151],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001621624,0.00007385665,0.0004052852,0.01018416,0.00008047996,0.0004599602,0.0001007827,0.0006905972,0.01255967,0.009854783,0.01233537,0.953093],"study_design_scores_gemma":[0.00003676669,0.0001119377,0.0007452687,0.002305576,0.0002285376,0.00206092,0.0001234529,0.0002904642,0.007923814,0.002775247,0.9833633,0.00003475583],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.0002719516,0.9980489,0.0007446373,0.0001537091,0.0001340035,0.00000256431,0.00001872106,0.000009488214,0.0006159425],"genre_scores_gemma":[0.001616958,0.9962787,0.001034698,0.0002446381,0.0001533551,0.000007489196,0.00005374227,0.000004509614,0.0006058473],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.001762328,"threshold_uncertainty_score":0.008532643,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1073557764000626,"score_gpt":0.358798363997557,"score_spread":0.2514425875974944,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}