{"id":"W2051585511","doi":"10.1111/tbed.12357","title":"Phylogenetic Analysis of the Spike (S) Gene of the New Variants of Porcine Epidemic Diarrhoea Virus in Taiwan","year":2015,"lang":"en","type":"article","venue":"Transboundary and Emerging Diseases","topic":"Animal Virus Infections Studies","field":"Agricultural and Biological Sciences","cited_by":52,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Ministry of Science and Technology, Taiwan","keywords":"Phylogenetic tree; Biology; Spike (software development); Virology; Gene; Genetics; Virus; Phylogenetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002293164,0.0002191826,0.0001983789,0.000711588,0.0002698244,0.0003195918,0.0001447585,0.0002462364,0.000429408],"category_scores_gemma":[0.0005177917,0.0001093561,0.0004860635,0.0007694788,0.0002070215,0.0001976277,0.0003335833,0.0003810524,0.0001781556],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002619212,"about_ca_system_score_gemma":0.0002884703,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.002473108,"about_ca_topic_score_gemma":0.00296452,"domain_scores_codex":[0.9998744,0.00001934974,0.00001903807,0.00003520784,0.00002055175,0.00003154165],"domain_scores_gemma":[0.999642,0.0000810358,0.00008437825,0.00003472702,0.00008246325,0.00007535595],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0009795281,0.0001171456,0.497989,0.0001631491,0.0001548101,0.002359561,0.001598443,0.001233058,0.4779684,0.0002142824,0.000236411,0.01698625],"study_design_scores_gemma":[0.00004445382,0.0005958336,0.9695008,0.0000558845,0.0001311451,0.003644188,0.001796538,0.003575516,0.01685379,0.0001707108,0.003603525,0.00002743515],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9991167,0.0001111981,0.0003502033,0.00001838732,0.000003731288,0.000007866931,0.0001350972,0.000002419268,0.0002543491],"genre_scores_gemma":[0.9972178,0.0001253093,0.0007776744,0.00004184235,0.000004319311,0.0000139699,0.001550958,0.000004249829,0.000263971],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.002473108,"threshold_uncertainty_score":0.004917443,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02427310800691686,"score_gpt":0.2419687185379922,"score_spread":0.2176956105310754,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}