{"id":"W2051613546","doi":"10.1107/s1744309107018945","title":"Structure of O67745_AQUAE, a hypothetical protein from<i>Aquifex aeolicus</i>","year":2007,"lang":"en","type":"article","venue":"Acta Crystallographica Section F Structural Biology and Crystallization Communications","topic":"Enzyme Structure and Function","field":"Materials Science","cited_by":7,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Lawrence Berkeley National Laboratory; Basic Energy Sciences; U.S. Public Health Service; Office of Science; National Institutes of Health; University of Toronto; U.S. Department of Energy","keywords":"Aquifex aeolicus; Protein Data Bank (RCSB PDB); Subfamily; Structural genomics; Crystallography; Hydrolase; Protein Data Bank; Domain (mathematical analysis); Protein structure; Chemistry; Biology; Computational biology; Enzyme; Biochemistry; Gene; Mathematics","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002758506,0.0002811343,0.0003422715,0.0002969419,0.000576782,0.00005080087,0.0005397299,0.0004602741,0.0005407763],"category_scores_gemma":[0.0001300767,0.0002413199,0.0001007661,0.0006550889,0.001139131,0.000308532,0.0002519751,0.0003493536,5.395016e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003082707,"about_ca_system_score_gemma":0.00004031463,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002897507,"about_ca_topic_score_gemma":0.001278526,"domain_scores_codex":[0.9980571,0.0002675418,0.0006884045,0.0004552295,0.0001860131,0.000345746],"domain_scores_gemma":[0.997948,0.0002814871,0.0004173593,0.000926332,0.0002862735,0.0001405835],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001087408,0.00002261094,0.004789592,0.0000167698,0.00003828925,3.107959e-7,0.0002843367,0.000007607114,0.9781281,0.01602067,0.00004597467,0.0005369468],"study_design_scores_gemma":[0.003821403,0.001280511,0.191524,0.0001903459,0.0004413066,0.0002248651,0.002093748,0.0007731539,0.4243352,0.2898321,0.08340002,0.002083339],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9844459,0.000454413,0.01270256,0.0004831759,0.0003388451,0.0004146608,0.0002628085,0.0001623016,0.0007353535],"genre_scores_gemma":[0.9907387,0.0001323177,0.00819163,0.0001644935,0.0001647313,0.00001165291,0.0005466036,0.00002321245,0.00002666773],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.553793,"threshold_uncertainty_score":0.9840738,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01156458514050296,"score_gpt":0.2582304186529227,"score_spread":0.2466658335124197,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}