{"id":"W2051656182","doi":"10.1002/elps.200700247","title":"A study of comparability in amplified fragment length polymorphism profiling using a simple model system","year":2007,"lang":"en","type":"article","venue":"Electrophoresis","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":5,"is_retracted":false,"has_abstract":true,"ca_institutions":"Institute for Biological Sciences","funders":"","keywords":"Amplified fragment length polymorphism; Biology; Molecular biology; DNA; EcoRI; Chromatography; Genetics; Chemistry; Plasmid; Genetic diversity","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003580537,0.0001312065,0.0002378643,0.00007536394,0.00009266743,0.00001329126,0.0001495892,0.00004635117,0.00008592445],"category_scores_gemma":[0.000009783348,0.0001260234,0.00005342155,0.000322957,0.00004312159,0.00009012918,0.0000962211,0.0001513374,0.000009635186],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0006847124,"about_ca_system_score_gemma":0.00001614569,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005084946,"about_ca_topic_score_gemma":0.002242741,"domain_scores_codex":[0.9986966,0.0000572734,0.0004219725,0.000302549,0.0001694464,0.0003521414],"domain_scores_gemma":[0.9995089,0.00003658409,0.0001214251,0.0002630195,0.00001024337,0.00005983982],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001339401,0.0006334037,0.01571048,0.00001208028,0.00001437952,0.000010497,0.0009575515,0.00740536,0.9748287,0.00002959983,0.00001454229,0.0002494671],"study_design_scores_gemma":[0.002140208,0.0007844988,0.410612,0.00006694877,0.0001057952,0.00004658056,0.00800392,0.08808237,0.4893576,0.0001196389,0.00004946997,0.0006309249],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953741,0.00002243188,0.003512965,0.000005441788,0.00003682423,0.0005340705,0.000005316256,0.00002333107,0.0004854778],"genre_scores_gemma":[0.9983653,0.000001813532,0.001554335,0.00001434876,0.00001302339,0.00001195132,0.000002238259,0.0000132759,0.00002373406],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4854711,"threshold_uncertainty_score":0.7686951,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02667904374626309,"score_gpt":0.2819947681234879,"score_spread":0.2553157243772249,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}