{"id":"W2051807614","doi":"10.1128/jvi.06682-11","title":"Impact of HLA-B*81-Associated Mutations in HIV-1 Gag on Viral Replication Capacity","year":2012,"lang":"en","type":"article","venue":"Journal of Virology","topic":"HIV Research and Treatment","field":"Immunology and Microbiology","cited_by":65,"is_retracted":false,"has_abstract":true,"ca_institutions":"AIDS Vancouver; Simon Fraser University","funders":"Fogarty International Center; National Institute of Allergy and Infectious Diseases; Center for AIDS Research, University of Washington; Emory University","keywords":"Biology; Mutation; Viral replication; Mutagenesis; Virology; Mutant; Virus; Reverse transcriptase; Genetics; Molecular biology; Polymerase chain reaction; Gene","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003933419,0.0003841767,0.0002805796,0.0002110691,0.0002010362,0.0004615055,0.0002175807,0.0003805567,0.001754576],"category_scores_gemma":[0.0006373248,0.000130387,0.0002671482,0.000154828,0.0002759231,0.0001984149,0.0002656654,0.0003774734,0.0004190079],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003227004,"about_ca_system_score_gemma":0.0003026097,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0007523093,"about_ca_topic_score_gemma":0.0004681103,"domain_scores_codex":[0.9996122,0.0001256291,0.00004954284,0.00005999007,0.00007926086,0.00007344755],"domain_scores_gemma":[0.9995201,0.0001872926,0.0001120238,0.00006382966,0.00002754169,0.00008923635],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0004777255,0.0001064012,0.003432166,0.00002270845,0.00001657337,0.0001762752,0.00001941104,0.0003418883,0.9929442,0.0000797614,0.00002590803,0.002356896],"study_design_scores_gemma":[0.00008458048,0.002465372,0.03602756,0.00002228699,0.00007229745,0.002251482,0.00009488405,0.004984061,0.9525725,0.0001175875,0.001281013,0.00002625942],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9992888,0.0001825617,0.0001579087,0.00001655858,0.000004707356,0.00000537562,0.00006055497,0.000007982731,0.0002753998],"genre_scores_gemma":[0.9995145,0.00006633988,0.0001896282,0.00001271648,0.000002073286,0.000003251532,0.000059427,0.000007708654,0.0001444942],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001754576,"threshold_uncertainty_score":0.005869687,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02932921282272703,"score_gpt":0.328938159854466,"score_spread":0.2996089470317389,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}