{"id":"W2051846346","doi":"10.1080/10635150500221044","title":"Poriferan mtDNA and Animal Phylogeny Based on Mitochondrial Gene Arrangements","year":2005,"lang":"en","type":"article","venue":"Systematic Biology","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":152,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canadian Institute for Advanced Research; Université de Montréal","funders":"Canadian Institutes of Health Research; Health Canada; Genome Canada","keywords":"Biology; Phylum; Mitochondrial DNA; Phylogenetic tree; Phylogenetics; Deuterostome; Evolutionary biology; Zooid; Zoology; Gene; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001915674,0.0002159957,0.0003496729,0.00005265753,0.00009533468,0.00001711891,0.0001591911,0.0001732395,0.00001145377],"category_scores_gemma":[0.0000733358,0.0001728348,0.00008459066,0.00003844755,0.00009059951,4.794005e-7,0.00009841304,0.0000595602,0.00001758696],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001277874,"about_ca_system_score_gemma":0.00002832847,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006523201,"about_ca_topic_score_gemma":0.00001467262,"domain_scores_codex":[0.998739,0.0001605225,0.0003419119,0.00041729,0.00007242715,0.0002688302],"domain_scores_gemma":[0.9993422,0.0000305589,0.0001276205,0.0003744711,0.00005039971,0.00007474009],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001089312,0.00005764078,0.004078705,0.0005839057,0.0001232316,0.00000106517,0.00005803025,0.00005705233,0.994489,0.0001995581,0.00009678889,0.000146097],"study_design_scores_gemma":[0.01505457,0.01088554,0.07744561,0.001425189,0.0007454944,0.0001724733,0.0006197039,0.01025502,0.8677346,0.001420487,0.01093262,0.00330867],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9951932,0.001850103,0.001128162,0.0002739977,0.000313304,0.0006501058,0.00003814276,0.000006882065,0.0005461064],"genre_scores_gemma":[0.9951127,0.00003725095,0.003414778,0.0006073309,0.0006119538,0.000110441,0.00003195502,0.000018222,0.00005541157],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1267544,"threshold_uncertainty_score":0.7048001,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01070389927377686,"score_gpt":0.2389649442156629,"score_spread":0.228261044941886,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}