{"id":"W2051906074","doi":"10.1016/j.jaci.2012.06.023","title":"Autoimmunity in primary antibody deficiency is associated with protein tyrosine phosphatase nonreceptor type 22 (PTPN22)","year":2012,"lang":"en","type":"article","venue":"Journal of Allergy and Clinical Immunology","topic":"Diabetes and associated disorders","field":"Biochemistry, Genetics and Molecular Biology","cited_by":12,"is_retracted":false,"has_abstract":false,"ca_institutions":"Lambton College","funders":"National Health and Medical Research Council; Medical Research Council","keywords":"PTPN22; Genotype; Autoimmunity; Allele; Context (archaeology); Immunology; Odds ratio; Protein tyrosine phosphatase; Biology; Pathogenesis; Single-nucleotide polymorphism; Internal medicine; Genetics; Medicine; Antibody; Gene; Receptor","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004211317,0.001158075,0.0006926667,0.001486859,0.0007186051,0.0006013597,0.0003833621,0.001056375,0.003013628],"category_scores_gemma":[0.001158992,0.0005136602,0.0004665333,0.000929458,0.0006169598,0.0003744694,0.0005495145,0.0006794277,0.0006358309],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003249175,"about_ca_system_score_gemma":0.0002784713,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001377574,"about_ca_topic_score_gemma":0.0008132054,"domain_scores_codex":[0.9996537,0.00006463291,0.00005905807,0.00007478025,0.00005337804,0.00009443648],"domain_scores_gemma":[0.9992406,0.0002090053,0.0002210633,0.00005533518,0.00007092754,0.0002030863],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.004284133,0.0004635175,0.5420075,0.0003914469,0.0002695684,0.3520581,0.000563126,0.0001883545,0.0825615,0.0004376505,0.001874852,0.01490027],"study_design_scores_gemma":[0.0001387619,0.0007395303,0.5516204,0.0000438716,0.0003087051,0.4395061,0.000201816,0.0005991991,0.004799263,0.0003505023,0.001672286,0.00001954786],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947296,0.001824715,0.0004853247,0.000173094,0.00005641239,0.00001562408,0.0000929793,0.00006751937,0.00255465],"genre_scores_gemma":[0.9989188,0.0003557605,0.0001451902,0.00008638202,0.00008002262,0.000003552098,0.00006444504,0.000009379619,0.0003365327],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.003013628,"threshold_uncertainty_score":0.01008165,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01151190846450442,"score_gpt":0.2828805998443648,"score_spread":0.2713686913798603,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}