{"id":"W2052078512","doi":"10.1371/journal.pone.0116354","title":"An Ephemeral Sexual Population of Phytophthora infestans in the Northeastern United States and Canada","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Plant Pathogens and Resistance","field":"Agricultural and Biological Sciences","cited_by":43,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institute of Food and Agriculture; U.S. Department of Agriculture","keywords":"Phytophthora infestans; Biology; Genotype; Locus (genetics); Genetics; Population; Haplotype; Sexual reproduction; Microsatellite; Allele; Gene; Demography","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009445585,0.0000416497,0.00007436504,0.000004974691,0.00004122014,0.00001022936,0.00006847732,0.0000172453,0.000006352936],"category_scores_gemma":[0.000009649423,0.00001351084,0.000003915785,0.00009856208,0.00001376742,0.00003199346,0.000006098593,0.0000350082,1.323052e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004742608,"about_ca_system_score_gemma":0.000002807262,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.4384392,"about_ca_topic_score_gemma":0.9417506,"domain_scores_codex":[0.9995584,0.00006984614,0.0000847919,0.00007617219,0.0001304583,0.00008032112],"domain_scores_gemma":[0.9998288,0.00006565467,0.00003503904,0.00002755265,0.00001999252,0.00002297954],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00001504386,0.000194266,0.6996714,0.00001492561,0.000005019393,0.000002053456,0.0000476162,0.00002850991,0.2983811,0.00005366032,0.000004581508,0.001581825],"study_design_scores_gemma":[0.00003772459,0.0001147181,0.997374,0.00001609328,0.000005088914,5.831512e-7,0.0002384346,0.001680124,0.0003485648,0.00004989523,0.00009048671,0.00004429798],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9994913,0.00001545519,3.014659e-7,0.0002885259,0.000004601542,0.00005740922,0.000101377,0.000003904446,0.00003708991],"genre_scores_gemma":[0.9995607,0.00001250053,0.00002249183,0.0001195328,0.00003206912,0.000001872344,0.0002326497,2.58506e-7,0.00001788344],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5033114,"threshold_uncertainty_score":0.5653003,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02217896945482918,"score_gpt":0.1898113843224861,"score_spread":0.167632414867657,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}