{"id":"W2052130636","doi":"10.1016/s0168-9525(00)02007-2","title":"Horizontal transfer of catalase-peroxidase genes between Archaea and pathogenic bacteria","year":2000,"lang":"en","type":"review","venue":"Trends in Genetics","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":false,"ca_institutions":"Dalhousie University; Canadian Institute for Advanced Research","funders":"","keywords":"Scopus; Biology; Genome; Horizontal gene transfer; Metagenomics; Phylogenetic tree; Archaea; Thermotoga maritima; Gene; Genetics; Evolutionary biology; Library science; Computational biology; MEDLINE; Escherichia coli; Computer science","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0001418325,0.0005209883,0.001218135,0.0002269577,0.00004152943,0.00001393541,0.0003208663,0.0004516401,0.00002628294],"category_scores_gemma":[0.000005403901,0.0004787799,0.0003447922,0.0001943666,0.0002146158,5.501948e-7,0.0001643056,0.0001629178,0.0000031836],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001646007,"about_ca_system_score_gemma":0.0001010176,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000018541,"about_ca_topic_score_gemma":0.00009030983,"domain_scores_codex":[0.9980111,0.0001368677,0.0007191036,0.0006355813,0.0001245793,0.0003727965],"domain_scores_gemma":[0.9991781,0.00002918152,0.0001063178,0.0005461638,0.00002699593,0.0001133123],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.00001228796,0.00004048911,0.0005433653,0.0009002009,0.0002140952,0.000005193187,0.00006644367,0.000001582728,0.004029587,0.000004251308,0.00003068665,0.9941518],"study_design_scores_gemma":[0.0004736835,0.0004969714,0.002233218,0.0004538628,0.0006072161,0.00003060654,0.00001232611,7.748e-7,0.00267354,0.00001325483,0.9923848,0.0006197654],"study_design_candidate":"design_other","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.1683073,0.8302214,0.000007628606,0.000004475227,0.00008777936,0.0001950709,0.0010205,0.00000246476,0.0001533242],"genre_scores_gemma":[0.02514025,0.9727566,0.0005607386,0.000005773761,0.000301263,0.00004751922,0.0009109437,0.00007876707,0.0001981152],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9935321,"threshold_uncertainty_score":0.9997664,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03644223655672485,"score_gpt":0.2994912941568875,"score_spread":0.2630490576001627,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}