{"id":"W2052952514","doi":"10.1186/1759-8753-3-3","title":"Insertion site preference of Mu, Tn5, and Tn7 transposons","year":2012,"lang":"en","type":"article","venue":"Mobile DNA","topic":"Advanced biosensing and bioanalysis techniques","field":"Biochemistry, Genetics and Molecular Biology","cited_by":165,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Institute of Genetics; National Institute of Allergy and Infectious Diseases; Centre National de la Recherche Scientifique; Johns Hopkins University; Howard Hughes Medical Institute","keywords":"Transposable element; Biology; Genetics; Insertion; Genome; DNA; Transposon mutagenesis; Mutation; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00008072621,0.00007862136,0.00009489475,0.00002414881,0.00002899448,0.000003710959,0.00004178417,0.0000868785,0.000002184366],"category_scores_gemma":[0.00001123142,0.00006606374,0.00004350984,0.00005482426,0.00006399382,0.000004491519,0.00002315069,0.00003569248,0.000001053549],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000004149405,"about_ca_system_score_gemma":0.000006671339,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00001083338,"about_ca_topic_score_gemma":0.00001739933,"domain_scores_codex":[0.9995498,0.00002371693,0.0001106785,0.0001346114,0.00005359146,0.0001276068],"domain_scores_gemma":[0.9997017,0.000004573156,0.00004747426,0.0001655027,0.00003469554,0.00004599604],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00002234768,0.00005029816,0.00895864,0.00001244817,0.00001175068,1.24731e-7,0.00004357472,0.000001006556,0.9849651,0.00001720658,0.00005741721,0.005860075],"study_design_scores_gemma":[0.00009664533,0.0001520563,0.01137619,0.000009071634,0.00002493099,0.00000393661,0.00002562857,0.00001061073,0.9797152,0.00002110766,0.008476096,0.00008855986],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980791,0.0005794543,0.0009425358,0.00001549829,0.00001969616,0.0000928181,0.00002199572,0.00001652343,0.0002323826],"genre_scores_gemma":[0.9979538,0.0002439289,0.001482815,0.00004523185,0.00005408028,0.00001178843,0.00006515928,0.000007040555,0.0001361816],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008418678,"threshold_uncertainty_score":0.2694001,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01243271333836592,"score_gpt":0.2523249000754339,"score_spread":0.239892186737068,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}