{"id":"W2053492299","doi":"10.1139/b09-056","title":"Patterns of defence gene expression in the tomato–<i>Verticillium</i>interaction","year":2009,"lang":"en","type":"article","venue":"Botany","topic":"Plant-Microbe Interactions and Immunity","field":"Agricultural and Biological Sciences","cited_by":14,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Guelph","funders":"","keywords":"Biology; Gene; Verticillium dahliae; Genetics; Gene expression; DNA microarray; Phenotype; Verticillium; Gene expression profiling; Microarray; Verticillium wilt; Microarray analysis techniques; Botany","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001109596,0.00005871949,0.00007350405,0.000007077047,0.00006593738,0.00002284465,0.0001814719,0.00003204183,0.0001304136],"category_scores_gemma":[0.0000215896,0.00001857805,0.00004279195,0.0001039613,0.000006475104,0.000128348,0.00001535449,0.00009763154,0.00001286911],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00001173737,"about_ca_system_score_gemma":0.000001825488,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003185132,"about_ca_topic_score_gemma":0.0003661524,"domain_scores_codex":[0.9994901,0.00007169515,0.0001527337,0.00008969992,0.00008742356,0.000108282],"domain_scores_gemma":[0.9997429,0.0001034948,0.00006010542,0.00005619893,0.0000220804,0.00001528304],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00001707248,0.0001048575,0.00436056,6.99794e-7,8.418605e-7,0.000002411916,0.00009572017,0.000002533063,0.9865829,0.0000126724,0.0002282075,0.008591496],"study_design_scores_gemma":[0.00005906098,0.0001176145,0.7974072,0.00005757432,0.000002633191,0.00003445313,0.0005878367,0.00004610886,0.1983921,0.00008404018,0.003148964,0.0000623981],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987354,0.0000612373,0.00001520904,0.0005111455,0.00006684587,0.000071182,0.00001893196,0.00001181922,0.0005082694],"genre_scores_gemma":[0.9995217,0.00005039482,0.00004151207,0.0003046165,0.0000354945,0.000002994666,0.000005480926,2.069262e-7,0.00003754934],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.7930467,"threshold_uncertainty_score":0.1427937,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02169121731026443,"score_gpt":0.2393171273433814,"score_spread":0.217625910033117,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}