{"id":"W2053909542","doi":"10.1371/journal.pone.0101510","title":"Epidemiology and Outcomes of Invasive Candidiasis Due to Non-albicans Species of Candida in 2,496 Patients: Data from the Prospective Antifungal Therapy (PATH) Registry 2004–2008","year":2014,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":401,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Toronto","funders":"National Institute of Allergy and Infectious Diseases; Astellas Pharma; Thomas Jefferson University; University of Arkansas for Medical Sciences; Hamilton Health Sciences; University of Minnesota; Bunning Food Allergy Institute, Ann and Robert H. Lurie Children's Hospital of Chicago; University of Miami; University of Pennsylvania; Massachusetts General Hospital; University of Nebraska Medical Center; University of Washington; Emory University; Medical Center, University of Pittsburgh; City of Hope; University of Pittsburgh; Johns Hopkins University; University of Texas MD Anderson Cancer Center; Pfizer","keywords":"Corpus albicans; Epidemiology; Fluconazole; Candida albicans; Candida parapsilosis; Internal medicine; Microbiology; Candida krusei; Invasive candidiasis; Candida glabrata; Antifungal; Medicine; Biology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006761951,0.0001784724,0.001074414,0.00006105291,0.00004905821,0.000004012615,0.0003014058,0.0001061617,0.0001011605],"category_scores_gemma":[0.006241031,0.0001148122,0.00005486279,0.0001963596,0.0003881773,0.00009248204,0.0001425783,0.0002188875,0.000005190434],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00006526554,"about_ca_system_score_gemma":0.0001525072,"about_ca_topic_candidate":true,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.007884884,"about_ca_topic_score_gemma":0.01148641,"domain_scores_codex":[0.9982412,0.0001655366,0.0005648445,0.0004774757,0.0002886888,0.000262275],"domain_scores_gemma":[0.996515,0.001741001,0.0002652513,0.001146162,0.0002219877,0.0001106288],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0006667473,0.0009801785,0.9901528,0.00009070511,0.0002722792,0.000003972074,0.001047353,3.125175e-7,0.00547063,0.00003799321,0.00109936,0.0001776236],"study_design_scores_gemma":[0.001573014,0.0004769779,0.9876884,0.0003504402,0.0000968649,3.416606e-7,0.0006542742,0.0000195024,0.00879774,0.0002115336,0.0000247627,0.0001061588],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9959337,0.0005571966,0.00004918193,0.001292151,0.00003224725,0.0008935209,0.0007327028,0.000008157689,0.0005011642],"genre_scores_gemma":[0.9976174,0.0004811852,0.0007805697,0.0006486229,0.00006769099,0.00002134835,0.0001432822,0.00001514242,0.0002247421],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.005564836,"threshold_uncertainty_score":0.9987217,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.07216208985470919,"score_gpt":0.2902963305008038,"score_spread":0.2181342406460947,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}