{"id":"W2054024105","doi":"10.1016/s0042-6822(03)00512-9","title":"Genetic and phylogenetic characterization of the type II cyclobutane pyrimidine dimer photolyases encoded by Leporipoxviruses","year":2003,"lang":"en","type":"article","venue":"Virology","topic":"Aquaculture disease management and microbiota","field":"Immunology and Microbiology","cited_by":27,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Guelph","funders":"Natural Sciences and Engineering Research Council of Canada; Canadian Institutes of Health Research","keywords":"Photolyase; Pyrimidine dimer; Biology; Gene; DNA; Escherichia coli; Molecular biology; DNA repair; Open reading frame; Prophage; Ultraviolet light; Biochemistry; Peptide sequence; Bacteriophage; Chemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00005278445,0.0001542406,0.0002195811,0.00004207329,0.0001617955,0.000004162353,0.0001415848,0.0001689004,0.0006185232],"category_scores_gemma":[0.00004878553,0.0001086551,0.00004649849,0.0001305692,0.0003231868,0.00002451935,0.0000973068,0.0000952708,0.000037567],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000006840589,"about_ca_system_score_gemma":0.00001987578,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0000170793,"about_ca_topic_score_gemma":0.000006984499,"domain_scores_codex":[0.9991137,0.0001865089,0.0002186802,0.0002429835,0.00002067116,0.0002175063],"domain_scores_gemma":[0.9995431,0.0000246521,0.0001446684,0.0002357623,0.00003641766,0.00001541522],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000528399,0.0001032893,0.004925991,0.00001187031,0.0001052195,0.000001435285,0.000137971,0.000001121129,0.9925512,0.0002352092,0.001596145,0.0002776759],"study_design_scores_gemma":[0.0007823071,0.0001853871,0.06359436,0.000007801025,0.0001934632,0.00006452753,0.00004270659,0.000001219,0.8143865,0.00007532837,0.120498,0.0001683053],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953967,0.003349553,0.00003622698,0.0001266421,0.0004365281,0.0002535178,0.0000574305,0.00002053978,0.0003228146],"genre_scores_gemma":[0.9968719,0.000360618,0.00001776177,0.0005151943,0.00001080446,0.00001029291,0.00009415244,0.00001323822,0.002106066],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1781647,"threshold_uncertainty_score":0.6772395,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.006112511217899436,"score_gpt":0.1933730825342788,"score_spread":0.1872605713163794,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}