{"id":"W2054929185","doi":"10.1099/ijs.0.048371-0","title":"Molecular signatures for the class Coriobacteriia and its different clades; proposal for division of the class Coriobacteriia into the emended order Coriobacteriales , containing the emended family Coriobacteriaceae and Atopobiaceae fam. nov., and Eggerthellales ord. nov., containing the family Eggerthellaceae fam. nov.","year":2013,"lang":"en","type":"article","venue":"INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":98,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Phylogenetic tree; Clade; Phylum; Phylogenetics; Evolutionary biology; Genetics; Genome; 16S ribosomal RNA; Bacterial genome size; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0003718082,0.0005326442,0.0003504202,0.001054368,0.0004098627,0.000686667,0.0003626929,0.0005909929,0.0007341271],"category_scores_gemma":[0.0006447259,0.0002014162,0.0002936096,0.0008707457,0.0003979867,0.0003712608,0.0006038363,0.000428717,0.0005482945],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000336867,"about_ca_system_score_gemma":0.000479953,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001593019,"about_ca_topic_score_gemma":0.001657855,"domain_scores_codex":[0.999713,0.00002330078,0.00002290058,0.0001268652,0.00005427585,0.00005973339],"domain_scores_gemma":[0.9992951,0.00008206848,0.0002405212,0.00007118255,0.0001436259,0.0001674705],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"theoretical_or_conceptual","study_design_scores_codex":[0.0003793974,0.00005313056,0.06794871,0.0002060023,0.00003502956,0.0002732637,0.0005472353,0.0001687206,0.9121556,0.0002389939,0.0002037952,0.01779011],"study_design_scores_gemma":[0.00004601834,0.0003953913,0.9165397,0.000109532,0.0001250918,0.002168509,0.0009072327,0.002344251,0.05995531,0.000568116,0.01679375,0.0000470817],"study_design_candidate":"theoretical_or_conceptual","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9882802,0.00462476,0.003444256,0.0001236733,0.00002539478,0.0000452863,0.001497789,0.00008080565,0.001877779],"genre_scores_gemma":[0.9864917,0.001070653,0.006911263,0.0001160266,0.00002478031,0.00005569474,0.004437299,0.0000323096,0.0008601842],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001593019,"threshold_uncertainty_score":0.00316745,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01226040599988162,"score_gpt":0.238312595904382,"score_spread":0.2260521899045004,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}