{"id":"W2055077060","doi":"10.1128/jvi.01079-12","title":"Hepatitis C Virus Envelope Glycoprotein Fitness Defines Virus Population Composition following Transmission to a New Host","year":2012,"lang":"en","type":"article","venue":"Journal of Virology","topic":"Hepatitis C virus research","field":"Medicine","cited_by":32,"is_retracted":false,"has_abstract":true,"ca_institutions":"KMT Hepatech (Canada); University of Alberta","funders":"National Institute of Allergy and Infectious Diseases; Canadian Institutes of Health Research","keywords":"Biology; Selective sweep; Hepatitis C virus; Population; Virology; Glycoprotein; Virus; Viral entry; Viral evolution; Hepacivirus; Viral envelope; Glycosylation; Genetics; Viral replication; Gene; Genome; Genotype","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004646502,0.0001212478,0.0001751166,0.000267506,0.0001997655,0.0005838088,0.0001777995,0.000198267,0.000332873],"category_scores_gemma":[0.0009606471,0.000118586,0.0001638956,0.0001181391,0.0002731153,0.0003113398,0.0003161179,0.00027965,0.00011584],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0003827472,"about_ca_system_score_gemma":0.00014219,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001087411,"about_ca_topic_score_gemma":0.0009611016,"domain_scores_codex":[0.9998578,0.00003200232,0.000007910033,0.00004148911,0.0000308952,0.00002997677],"domain_scores_gemma":[0.999765,0.00008524035,0.00005791594,0.00002382616,0.00003381795,0.00003421828],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.000579113,0.0001379808,0.1724706,0.00005495089,0.0001504754,0.0004051524,0.0005603783,0.04788682,0.7445408,0.005328678,0.0001751271,0.02770983],"study_design_scores_gemma":[0.00003690922,0.0008657444,0.422397,0.00002907148,0.0001195359,0.001036154,0.0007238692,0.4567611,0.1098851,0.005707128,0.002329573,0.000108746],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9969215,0.0000599987,0.002479634,0.00001492433,0.000001089181,0.000003393072,0.00001946749,0.00000764685,0.0004923376],"genre_scores_gemma":[0.998996,0.00005584109,0.0006957504,0.000009163625,0.000001568187,0.000005819163,0.00004939194,0.000005155891,0.0001814162],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001087411,"threshold_uncertainty_score":0.00277704,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03120870320102306,"score_gpt":0.3355284117234591,"score_spread":0.3043197085224361,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}