{"id":"W2055154757","doi":"10.1529/biophysj.107.112805","title":"Distribution of Amino Acids in a Lipid Bilayer from Computer Simulations","year":2008,"lang":"en","type":"article","venue":"Biophysical Journal","topic":"Lipid Membrane Structure and Behavior","field":"Biochemistry, Genetics and Molecular Biology","cited_by":549,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of Calgary","funders":"Alberta Ingenuity","keywords":"Molecular dynamics; Membrane; Side chain; Chemistry; Lipid bilayer; Bilayer; Chemical physics; Polar; Amino acid; Phase (matter); Crystallography; Computational chemistry; Organic chemistry; Polymer; Biochemistry; Physics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002942196,0.0004913346,0.0005233737,0.001209801,0.001004285,0.0007697176,0.0006658729,0.001055624,0.002564364],"category_scores_gemma":[0.001798497,0.0004996008,0.0004844631,0.001166969,0.0007137893,0.0007974124,0.0004304953,0.0008533526,0.0002907069],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001237009,"about_ca_system_score_gemma":0.0009281832,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.008909599,"about_ca_topic_score_gemma":0.005169876,"domain_scores_codex":[0.9998724,0.00002573101,0.000006978219,0.00002156915,0.00004315038,0.00003007686],"domain_scores_gemma":[0.999369,0.0003020369,0.00005365181,0.00005839671,0.0001399229,0.00007717444],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"simulation_or_modeling","study_design_gemma":"simulation_or_modeling","study_design_scores_codex":[0.000273321,0.00008954207,0.003390615,0.0001080653,0.00006173047,0.0002312228,0.0001088715,0.9745599,0.01262671,0.005242823,0.0006671015,0.002640067],"study_design_scores_gemma":[0.00006347633,0.00004549889,0.001508199,0.00001778402,0.0000208211,0.00003756182,0.00004478226,0.9910352,0.004367275,0.002522451,0.0003184583,0.00001862629],"study_design_candidate":"simulation_or_modeling","study_design_consensus":"simulation_or_modeling","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9873788,0.0002147293,0.005998975,0.000186017,0.00002166589,0.00003179253,0.0007936303,0.0001601393,0.005214359],"genre_scores_gemma":[0.9941777,0.0001845536,0.004323468,0.00003708853,0.000009676025,0.00005765679,0.0007067596,0.00007260481,0.0004304776],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.008909599,"threshold_uncertainty_score":0.01771551,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0130618756911315,"score_gpt":0.2501205820461216,"score_spread":0.2370587063549901,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}