{"id":"W2055532157","doi":"10.1371/journal.pone.0011066","title":"Contrasting Transcriptional Responses of a Virulent and an Attenuated Strain of Mycobacterium tuberculosis Infecting Macrophages","year":2010,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Tuberculosis Research and Epidemiology","field":"Medicine","cited_by":48,"is_retracted":false,"has_abstract":true,"ca_institutions":"BC Children's Hospital; University of British Columbia","funders":"British Columbia Lung Association; Wellcome Trust; Child and Family Research Institute","keywords":"Virulence; Mycobacterium tuberculosis; Microbiology; Tuberculosis; Strain (injury); Biology; Virology; Medicine; Genetics; Gene; Pathology","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001501498,0.0001782463,0.000253459,0.000159654,0.0001406918,0.0003372495,0.0001192697,0.000252802,0.0006569098],"category_scores_gemma":[0.0002558207,0.0001021508,0.0001800865,0.0001474232,0.0002093083,0.0001607339,0.0002758579,0.0003002457,0.0002030491],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001747034,"about_ca_system_score_gemma":0.0001348063,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0003003488,"about_ca_topic_score_gemma":0.0003208123,"domain_scores_codex":[0.9998236,0.0000227029,0.00001161419,0.00005609426,0.0000399268,0.00004615601],"domain_scores_gemma":[0.9998463,0.00003576674,0.00004210125,0.00001690755,0.0000278944,0.00003104506],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001797784,0.00001842093,0.00222776,0.00002794514,0.00000367413,0.00002537782,0.00003195787,0.00002687704,0.9969599,0.00001919923,0.00001849036,0.0004606271],"study_design_scores_gemma":[0.00004052488,0.001833253,0.3017115,0.00003680417,0.0001018087,0.0008634864,0.001040599,0.002286496,0.6901897,0.0002687747,0.001607083,0.00002006667],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9987888,0.0002065935,0.0003933266,0.00003166484,0.000007112378,0.000006641825,0.0003506236,0.000008159945,0.000207153],"genre_scores_gemma":[0.9969611,0.0002261074,0.0008469497,0.0000845312,0.00001571013,0.00003701989,0.001210637,0.00001054341,0.0006074467],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.0006569098,"threshold_uncertainty_score":0.002197564,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.05750350073861613,"score_gpt":0.3192231389073762,"score_spread":0.2617196381687601,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}