{"id":"W2055982323","doi":"10.1016/s0042-6822(03)00172-7","title":"The complete sequence of marine bacteriophage VpV262 infecting vibrio parahaemolyticus indicates that an ancestral component of a T7 viral supergroup is widespread in the marine environment","year":2003,"lang":"en","type":"article","venue":"Virology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":71,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Biology; Bacteriophage; Vibrio parahaemolyticus; Gene; 16S ribosomal RNA; Marine bacteriophage; Sequence analysis; Genetics; Microbiology; Genome; Sequence (biology); Bacteria","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0004606665,0.0001988512,0.0002913911,0.00004175157,0.0001625992,0.00002681355,0.000446991,0.00008452425,0.001346644],"category_scores_gemma":[0.00001735671,0.0001331831,0.00008629333,0.0001226278,0.0008034793,0.0002256701,0.0002929948,0.0002748376,0.00005167441],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008796715,"about_ca_system_score_gemma":0.00001016964,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.003897609,"about_ca_topic_score_gemma":0.001272653,"domain_scores_codex":[0.9983281,0.0003595806,0.0004401209,0.0003181574,0.000162287,0.0003916979],"domain_scores_gemma":[0.9989718,0.0002729197,0.000265437,0.0004307079,0.000003955964,0.0000552331],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.00006073843,0.0002299732,0.0814501,0.000007336361,0.0000192014,0.00001805964,0.0008771206,0.0001147921,0.9123192,0.0002285568,0.00002072802,0.004654235],"study_design_scores_gemma":[0.0004358955,0.0004491144,0.953527,0.000008872274,0.000023875,0.0001931217,0.0002112036,0.0002336379,0.03872959,0.000286171,0.005750985,0.0001505616],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9980602,0.00002518449,0.00003274805,0.0003465964,0.0001193557,0.0002426601,0.00003459872,0.000008412389,0.00113029],"genre_scores_gemma":[0.9990015,0.0001399462,0.0003658348,0.0003382658,0.00001276143,0.00002876214,0.00002142058,0.00001306268,0.0000784264],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.8735896,"threshold_uncertainty_score":0.9995663,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03029538613667985,"score_gpt":0.2543489093582174,"score_spread":0.2240535232215375,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}