{"id":"W2056302622","doi":"10.1016/j.meegid.2011.05.004","title":"Molecular characterization and phylogenetic analysis of full-genome HBV subgenotype D3 sequences from Serbia","year":2011,"lang":"en","type":"article","venue":"Infection Genetics and Evolution","topic":"Hepatitis B Virus Studies","field":"Medicine","cited_by":9,"is_retracted":false,"has_abstract":false,"ca_institutions":"Canadian Science Centre for Human and Animal Health; Public Health Agency of Canada","funders":"","keywords":"Phylogenetic tree; HBsAg; Biology; Hepatitis B virus; Genotype; Genome; Phylogenetics; Virology; Evolutionary biology; Genetics; Gene; Virus","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00007703927,0.0001024856,0.0002339629,0.0002334915,0.00006792366,0.000008393933,0.00001732043,0.00008163755,0.00004789063],"category_scores_gemma":[0.00002255921,0.0001015271,0.00004594497,0.0003831896,0.00009324381,0.00003450572,0.00002974513,0.00004622137,0.000003210384],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003744486,"about_ca_system_score_gemma":0.00002315178,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00393817,"about_ca_topic_score_gemma":0.001642433,"domain_scores_codex":[0.9993057,0.00004063592,0.000221578,0.0002058094,0.0001179447,0.0001083028],"domain_scores_gemma":[0.9995351,0.00000925395,0.0001127565,0.0001286532,0.0001533101,0.00006093102],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0000195379,0.00002283667,0.5578324,0.00001554075,0.0002717463,9.945447e-7,0.0003237101,0.00002833384,0.4402139,0.00003728012,3.425723e-7,0.001233455],"study_design_scores_gemma":[0.0001775002,0.0002731486,0.9846812,0.00001438935,0.001159981,0.000004477847,0.000009820692,0.003756988,0.009587288,0.0001634948,0.00008007979,0.00009156468],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9835823,0.001509428,0.01450463,0.00001955215,0.00007779722,0.0001515289,0.00004187053,0.0000196326,0.00009324135],"genre_scores_gemma":[0.9964438,0.002773317,0.000583194,0.00003222248,0.00003788038,0.000009230253,0.0001003775,0.0000091026,0.00001084321],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.4306266,"threshold_uncertainty_score":0.5953361,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02004474185287384,"score_gpt":0.236186721913504,"score_spread":0.2161419800606302,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}