{"id":"W2056677222","doi":"10.1002/ibd.20144","title":"Assessment of reliability and validity of IBD phenotyping within the National Institutes of Diabetes and Digestive and Kidney Diseases (NIDDK) IBD Genetics Consortium (IBDGC)","year":2007,"lang":"en","type":"article","venue":"Inflammatory Bowel Diseases","topic":"Inflammatory Bowel Disease","field":"Biochemistry, Genetics and Molecular Biology","cited_by":45,"is_retracted":false,"has_abstract":true,"ca_institutions":"Montreal Heart Institute; Hospital for Sick Children; McGill University Health Centre; Montreal General Hospital; Mount Sinai Hospital; McGill University; SickKids Foundation; University of Toronto; Royal Victoria Hospital; Université de Montréal; Royal Victoria Regional Health Centre","funders":"National Institute of Diabetes and Digestive and Kidney Diseases","keywords":"Kappa; Cohen's kappa; Medicine; Inflammatory bowel disease; Gold standard (test); Receiver operating characteristic; Ulcerative colitis; Internal medicine; Genetic testing; Gastroenterology; Disease; Statistics","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.000652326,0.0002761119,0.0003151057,0.00008530908,0.0001447711,0.00002468748,0.0001845021,0.0001225391,0.000006954977],"category_scores_gemma":[0.001549117,0.0002323524,0.0001049025,0.00007335418,0.001794362,0.0000330858,0.0002940529,0.00009595209,1.505256e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002428197,"about_ca_system_score_gemma":0.0005864521,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000006024737,"about_ca_topic_score_gemma":0.00001402369,"domain_scores_codex":[0.998001,0.000195333,0.0007110405,0.0004383379,0.0004083984,0.000245883],"domain_scores_gemma":[0.9980208,0.0002646988,0.0005285649,0.0003586088,0.0004810902,0.0003462608],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.000213314,0.0001738432,0.9715948,0.0008564001,0.0001391519,0.000005597366,0.00009842835,0.0002293097,0.02543042,0.000951849,0.00009999898,0.0002069629],"study_design_scores_gemma":[0.0007858946,0.00009345142,0.9879093,0.0001249257,0.0002196076,0.000001714635,0.0001352056,0.0005415973,0.009124559,0.0006847254,0.0001407945,0.0002382234],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966649,0.001598771,0.0000921215,0.00003575771,0.0001282788,0.0004908836,0.0008095022,0.00001502574,0.000164745],"genre_scores_gemma":[0.9990418,0.000183649,0.0003789385,0.0001213573,0.0001298438,0.0000290245,0.00008399363,0.00002227504,0.000009137928],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01631457,"threshold_uncertainty_score":0.9475054,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01157675142113357,"score_gpt":0.2631646124932556,"score_spread":0.2515878610721221,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}