{"id":"W2057471560","doi":"10.1371/journal.pone.0019476","title":"Phylogeography and Genetic Structuring of European Nine-Spined Sticklebacks (Pungitius pungitius)—Mitochondrial DNA Evidence","year":2011,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Genetic diversity and population structure","field":"Biochemistry, Genetics and Molecular Biology","cited_by":54,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Japan Society for the Promotion of Science; Academy of Finland","keywords":"Biology; Phylogeography; Genetic diversity; Stickleback; Nucleotide diversity; Ecology; Haplotype; mtDNA control region; Zoology; Refugium (fishkeeping); Habitat; Phylogenetics; Population; Fishery; Genetics; Allele","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004523825,0.0001735882,0.0001686325,0.0008768636,0.0003550314,0.0004107544,0.0002050624,0.0001720184,0.0006368254],"category_scores_gemma":[0.0006341659,0.0001736938,0.000173964,0.0006411743,0.0006437549,0.0002248156,0.0005672397,0.000242365,0.00007799945],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002439282,"about_ca_system_score_gemma":0.0001726032,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00692827,"about_ca_topic_score_gemma":0.01106488,"domain_scores_codex":[0.999815,0.000037992,0.00001413529,0.00008147017,0.0000241672,0.00002711256],"domain_scores_gemma":[0.999606,0.00008845524,0.0001475409,0.00003200116,0.00004600781,0.00008006972],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.00014863,0.00003502104,0.9843247,0.00001484279,0.00008265202,0.000149666,0.0008585787,0.0002868748,0.008103909,0.00009730312,0.00003130557,0.005866507],"study_design_scores_gemma":[0.000002823912,0.00001776399,0.9995044,0.000003274777,0.000005393544,0.00006264008,0.0001005287,0.0001716272,0.00004615967,0.00002225468,0.00006162009,0.000001497139],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9998265,0.00002276575,0.00003645549,0.000003979445,3.002925e-7,8.324982e-7,0.00001059616,6.983567e-7,0.00009784198],"genre_scores_gemma":[0.9997349,0.00003191476,0.0001060935,0.000005588221,8.821441e-7,0.000001683073,0.00007094666,7.272934e-7,0.00004719526],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.00692827,"threshold_uncertainty_score":0.01377589,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04284927120149849,"score_gpt":0.2069939767938428,"score_spread":0.1641447055923443,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}