{"id":"W2057707585","doi":"10.4236/ns.2010.210138","title":"Assessment of a short phylogenetic marker based on comparisons of 3’ end 16S rDNA and 5’ end 16S-23S ITS nucleotide sequences of the Bacillus cereus group","year":2010,"lang":"en","type":"article","venue":"Natural Science","topic":"Bacillus and Francisella bacterial research","field":"Biochemistry, Genetics and Molecular Biology","cited_by":1,"is_retracted":false,"has_abstract":true,"ca_institutions":"Université du Québec à Montréal; Agriculture and Agri-Food Canada","funders":"","keywords":"Biology; Cereus; Bacillus cereus; Phylogenetic tree; 16S ribosomal RNA; Bacillus licheniformis; Genetics; Bacillus anthracis; Microbiology; Bacillus (shape); Bacillus subtilis; Gene; Bacteria","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0006245194,0.0005910419,0.0005045088,0.001217903,0.0003748814,0.0007544089,0.0002431468,0.0005363071,0.0009228921],"category_scores_gemma":[0.001584376,0.0002387526,0.0003646351,0.001222605,0.0002788223,0.0005206749,0.000442126,0.000577701,0.0006014087],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001242373,"about_ca_system_score_gemma":0.000249076,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0002228048,"about_ca_topic_score_gemma":0.0004105445,"domain_scores_codex":[0.9995289,0.0001255888,0.00005303417,0.0001092771,0.0001363526,0.00004691197],"domain_scores_gemma":[0.9984946,0.0003653855,0.0006467156,0.00006519908,0.0002111323,0.0002169466],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0005420776,0.00006479552,0.01690364,0.0001698792,0.00003962605,0.00009676785,0.0001944416,0.000204771,0.9717459,0.0001261361,0.0000389885,0.009873079],"study_design_scores_gemma":[0.0000833737,0.003953554,0.4896284,0.0002205795,0.0004324341,0.002431245,0.001301671,0.01150712,0.4771406,0.0007423045,0.01247792,0.00008074677],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9862147,0.000531519,0.01147359,0.00003958242,0.00002424922,0.00004217711,0.0008586344,0.00005347881,0.0007621623],"genre_scores_gemma":[0.9271458,0.0003702391,0.06743112,0.00003454289,0.00001992539,0.00009670145,0.004210346,0.00003903126,0.0006522996],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001217903,"threshold_uncertainty_score":0.003302813,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01266837247185076,"score_gpt":0.2920346278990549,"score_spread":0.2793662554272041,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}