{"id":"W2057715520","doi":"10.1101/gr.101246.109","title":"Genome-wide evidence for selection acting on single amino acid repeats","year":2010,"lang":"en","type":"article","venue":"Genome Research","topic":"RNA Research and Splicing","field":"Biochemistry, Genetics and Molecular Biology","cited_by":62,"is_retracted":false,"has_abstract":true,"ca_institutions":"McMaster University","funders":"","keywords":"Biology; Exon; Genetics; Alternative splicing; Gene; RNA splicing; Genome; Coding region; Computational biology; RNA","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0023323,0.0001430572,0.0001348164,0.0002078699,0.000520941,0.0001357308,0.0004321902,0.0001957245,0.0000617737],"category_scores_gemma":[0.003551248,0.0001363368,0.00009997906,0.0002979964,0.0001247302,0.00001250599,0.0002115714,0.0006117001,0.0000786975],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00008460948,"about_ca_system_score_gemma":0.0002272249,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00004506466,"about_ca_topic_score_gemma":0.0001636943,"domain_scores_codex":[0.997586,0.0001581025,0.0002006379,0.0006255343,0.0005142235,0.0009154843],"domain_scores_gemma":[0.9984082,0.0002659962,0.00004812098,0.0005310001,0.0005049641,0.0002417373],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003643638,0.00006082168,0.001609125,0.00004524708,0.00002508504,0.000003574093,0.0000412267,0.00002022854,0.9904298,0.00001989278,0.0002711537,0.007109459],"study_design_scores_gemma":[0.0003683431,0.001726771,0.01163012,0.00002462677,0.000003696249,0.00001255538,0.00009487432,0.0001083716,0.9390972,0.00007465371,0.04666875,0.0001900215],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9953946,0.0004099673,0.001312386,0.000472372,0.00008856411,0.0006351581,0.000007929249,0.00001999729,0.001659028],"genre_scores_gemma":[0.9899095,0.0001613188,0.00139447,0.00007113988,0.0008397962,0.0001498443,0.00005275954,0.00004146628,0.007379712],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.05133261,"threshold_uncertainty_score":0.5559653,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1175336031585179,"score_gpt":0.4009083000390541,"score_spread":0.2833746968805362,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}