{"id":"W2057812948","doi":"10.1016/j.ttbdis.2010.07.001","title":"Plasmid profile analysis of Portuguese Borrelia lusitaniae strains","year":2010,"lang":"en","type":"article","venue":"Ticks and Tick-borne Diseases","topic":"Vector-borne infectious diseases","field":"Immunology and Microbiology","cited_by":3,"is_retracted":false,"has_abstract":false,"ca_institutions":"","funders":"Canadian Institute for Theoretical Astrophysics","keywords":"Plasmid; Borrelia burgdorferi; Biology; Borrelia; Ixodes ricinus; Microbiology; Virology; Gene; Genetics; Tick; Antibody","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["insufficient_payload"],"consensus_categories":[],"category_scores_codex":[0.0001150498,0.0002911979,0.0005991285,0.00037077,0.0001730209,0.00002587498,0.000209185,0.0002039522,0.006117535],"category_scores_gemma":[0.0002889972,0.0002301532,0.0003001283,0.0004248838,0.0005358839,0.0001301749,0.0001236579,0.0002565265,0.000200148],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000150869,"about_ca_system_score_gemma":0.0001215843,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000286275,"about_ca_topic_score_gemma":0.0002743401,"domain_scores_codex":[0.9984814,0.00008045984,0.0004233319,0.0004751918,0.00007371234,0.0004659242],"domain_scores_gemma":[0.9988232,0.0001634304,0.0001537432,0.0005308855,0.0001817272,0.0001469963],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.0005000533,0.003538719,0.4490848,0.0002463996,0.01042668,0.00008266534,0.0008773778,0.00004485791,0.4988686,0.01499038,0.007620773,0.01371864],"study_design_scores_gemma":[0.0009860644,0.000211362,0.9819062,0.00001622698,0.00520544,0.00001990074,0.0002039999,0.0001131164,0.008628546,0.0002374997,0.002103934,0.0003677213],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9930446,0.002630418,0.00002902158,0.00009562088,0.0004504591,0.0002724793,0.001607344,0.0001517102,0.001718388],"genre_scores_gemma":[0.9980153,0.00009129503,0.00002757064,0.0001107442,0.0000483419,0.00003711981,0.001039492,0.00002782101,0.0006022717],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5328214,"threshold_uncertainty_score":0.994791,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.005753218461306695,"score_gpt":0.2339987891620176,"score_spread":0.2282455707007109,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}