{"id":"W2057923039","doi":"10.1016/j.cub.2013.10.062","title":"Colponemids Represent Multiple Ancient Alveolate Lineages","year":2013,"lang":"en","type":"article","venue":"Current Biology","topic":"Protist diversity and phylogeny","field":"Biochemistry, Genetics and Molecular Biology","cited_by":51,"is_retracted":false,"has_abstract":false,"ca_institutions":"University of British Columbia","funders":"Canadian Institutes of Health Research; Russian Foundation for Basic Research; Canadian Institute for Advanced Research; John Simon Guggenheim Memorial Foundation","keywords":"Biology; Protist; Evolutionary biology; Phylogenetic tree; Genome; Phylogenetics; Sister group; Lineage (genetic); Genetics; Mitochondrial DNA; Phylogenomics; Gene; Clade","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002092008,0.0003050196,0.0002512244,0.0005420013,0.000665885,0.0009859763,0.0003544529,0.0007637649,0.001346205],"category_scores_gemma":[0.000400245,0.0002593916,0.0001432427,0.000357983,0.0006548945,0.0008640639,0.0006458272,0.0006846563,0.0003990097],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0007219682,"about_ca_system_score_gemma":0.0004356783,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00129655,"about_ca_topic_score_gemma":0.003450374,"domain_scores_codex":[0.9999156,0.000006549089,0.00000450556,0.00003524003,0.00001871047,0.00001936157],"domain_scores_gemma":[0.9997663,0.00004210832,0.00006188242,0.00002774895,0.0000413386,0.00006061945],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"observational","study_design_scores_codex":[0.001108477,0.00003782398,0.06638062,0.0002956193,0.00007437666,0.0009985245,0.001068143,0.0003977633,0.8969709,0.003894625,0.0001443011,0.02862876],"study_design_scores_gemma":[0.0000960561,0.0006890805,0.8757377,0.0001304439,0.0001799972,0.003563516,0.00142466,0.002616648,0.07565382,0.003914845,0.0359174,0.00007591094],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9938285,0.0006978139,0.002225975,0.0001104487,0.00001454117,0.00001225057,0.0001694829,0.00005827585,0.002882693],"genre_scores_gemma":[0.9958811,0.000544881,0.001744268,0.00007297306,0.0000178227,0.00001017599,0.0003130585,0.00001176064,0.001404103],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001346205,"threshold_uncertainty_score":0.005238235,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02117924290152232,"score_gpt":0.2729441293639764,"score_spread":0.2517648864624541,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}