{"id":"W2058422567","doi":"10.4161/auto.2825","title":"Autophagy Recognizes Intracellular Salmonella enterica serovar Typhimurium in Damaged Vacuoles","year":2006,"lang":"en","type":"review","venue":"Autophagy","topic":"Autophagy in Disease and Therapy","field":"Medicine","cited_by":128,"is_retracted":false,"has_abstract":true,"ca_institutions":"Hospital for Sick Children","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Vacuole; Biology; Salmonella enterica; Autophagy; Intracellular; Intracellular parasite; Cytosol; Microbiology; Population; Salmonella; Cell biology; Pathogen; Bacteria; Biochemistry; Cytoplasm; Apoptosis; Genetics; Enzyme","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow","insufficient_payload"],"consensus_categories":["metaepi_narrow","insufficient_payload"],"category_scores_codex":[0.0005368381,0.001326008,0.004174779,0.0009347795,0.0001313802,0.00009005498,0.0006701738,0.001115416,0.001377775],"category_scores_gemma":[0.0001142282,0.001143373,0.001299037,0.001167494,0.0002132651,0.0001655501,0.0002086158,0.00143515,0.001353835],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0004488197,"about_ca_system_score_gemma":0.000865111,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.0001501102,"about_ca_topic_score_gemma":0.00001351851,"domain_scores_codex":[0.994406,0.0005460578,0.001884927,0.001401939,0.0006356118,0.001125462],"domain_scores_gemma":[0.9969249,0.000320088,0.0007179439,0.001509902,0.0001220981,0.0004050699],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.0001204889,0.001172192,0.00002645755,0.01315839,0.000734321,0.004803218,0.0001033744,0.000002160402,0.0001282399,0.0001725476,0.005127884,0.9744507],"study_design_scores_gemma":[0.002046085,0.0002854802,0.0005819093,0.008910941,0.001695618,0.0004019556,0.00001680288,0.00004696493,0.0008650328,0.0003251446,0.9838095,0.001014551],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"review","genre_gemma":"review","genre_scores_codex":[0.001786754,0.9896995,0.00006972547,0.00006536574,0.0009011959,0.002027145,0.000123157,0.0004523459,0.004874742],"genre_scores_gemma":[0.0009641958,0.9851858,0.0008161243,0.0003748696,0.0009970001,0.0003470573,0.001322069,0.0003448508,0.009648031],"genre_candidate":"review","genre_consensus":"review","teacher_disagreement_score":0.9786816,"threshold_uncertainty_score":0.9999491,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.04153646797617262,"score_gpt":0.3514495483886408,"score_spread":0.3099130804124682,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}