{"id":"W2058522379","doi":"10.1139/w09-086","title":"Influence of RpoS, cAMP-receptor protein, and ppGpp on expression of the<i>opgGH</i>operon and osmoregulated periplasmic glucan content of<i>Salmonella enterica</i>serovar Typhimurium","year":2009,"lang":"en","type":"article","venue":"Canadian Journal of Microbiology","topic":"Cancer Research and Treatments","field":"Biochemistry, Genetics and Molecular Biology","cited_by":3,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"","keywords":"rpoS; Osmotic concentration; Operon; Periplasmic space; Salmonella enterica; Biology; Sigma factor; Microbiology; Salmonella; cAMP receptor protein; Biochemistry; Gene expression; Bacteria; Gene; Escherichia coli; Promoter; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.00009965003,0.0001179653,0.0002505463,0.00008331426,0.00004102233,0.00000467733,0.0001719744,0.0001070329,0.000009928261],"category_scores_gemma":[0.00005343368,0.00008246404,0.00006514247,0.0000588912,0.0003414977,0.000004986018,0.00002893441,0.0001024409,3.220715e-7],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00003154979,"about_ca_system_score_gemma":0.0003667799,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001254812,"about_ca_topic_score_gemma":0.001198421,"domain_scores_codex":[0.999215,0.00009131362,0.0003037263,0.0001465291,0.00004513031,0.0001982859],"domain_scores_gemma":[0.9991722,0.00000838727,0.0002891724,0.0001673997,0.0001862094,0.0001766028],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0003843152,0.00003255449,0.005982983,0.00002101415,0.00004948452,0.000004724155,0.00008515993,0.00002447697,0.9924213,0.000006381424,0.0003510737,0.0006364813],"study_design_scores_gemma":[0.0009820976,0.001789635,0.02534266,0.0001828054,0.00001442253,0.0001271794,0.00004241394,4.261247e-7,0.9688116,0.00001214027,0.002625512,0.00006907884],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9966852,0.002675471,0.000001764852,0.0002341446,0.0000428259,0.0002000629,0.0001405782,5.097805e-7,0.00001941793],"genre_scores_gemma":[0.9994888,0.000227128,0.00008382534,0.00009245981,0.00002014275,0.000001687889,0.00001467164,0.00000702471,0.00006421068],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.02360972,"threshold_uncertainty_score":0.3362786,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.007355988255445586,"score_gpt":0.2082420759076028,"score_spread":0.2008860876521572,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}