{"id":"W2058590983","doi":"10.1371/journal.pone.0080791","title":"Genomics Assisted Ancestry Deconvolution in Grape","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Horticultural and Viticultural Research","field":"Agricultural and Biological Sciences","cited_by":45,"is_retracted":false,"has_abstract":true,"ca_institutions":"Dalhousie University","funders":"Canada Research Chairs; U.S. Department of Agriculture","keywords":"Biology; Germplasm; Domestication; Hybrid; Cultivar; Introgression; Plant breeding; Biotechnology; Botany; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002909579,0.0004235582,0.0005922492,0.0008363422,0.0005275146,0.0009143078,0.0005795225,0.0005575752,0.0007743794],"category_scores_gemma":[0.005521666,0.0003522749,0.0006955605,0.0006309015,0.0003947399,0.00056689,0.001163845,0.0008468683,0.0003265678],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0005468889,"about_ca_system_score_gemma":0.0007977874,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.004524923,"about_ca_topic_score_gemma":0.005894317,"domain_scores_codex":[0.9991544,0.000390328,0.00002333316,0.0002596131,0.0001227883,0.00004942108],"domain_scores_gemma":[0.9991013,0.0005025104,0.00008172207,0.0001660414,0.0001146802,0.00003379643],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"observational","study_design_scores_codex":[0.0005774642,0.0002120065,0.03725095,0.00010905,0.0003705133,0.0003592491,0.001007003,0.4241092,0.07065479,0.02255669,0.001870313,0.4409228],"study_design_scores_gemma":[0.00002370493,0.00004157473,0.01153087,0.00001108109,0.00003100913,0.0001170059,0.00006007859,0.96605,0.009804294,0.01043794,0.001860205,0.00003227183],"study_design_candidate":"observational","study_design_consensus":null,"genre_codex":"methods","genre_gemma":"empirical","genre_scores_codex":[0.2101406,0.0001926162,0.7865851,0.0001450339,0.0000289388,0.00004282869,0.0002145548,0.001288491,0.001361888],"genre_scores_gemma":[0.495019,0.0001345687,0.5012425,0.0001068002,0.00002401515,0.00006960097,0.0009894326,0.0002764845,0.002137595],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.004524923,"threshold_uncertainty_score":0.01538754,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.1447410888282204,"score_gpt":0.2613295748308223,"score_spread":0.1165884860026018,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}