{"id":"W2059271401","doi":"10.1159/000142896","title":"Rapid Access to Genes of Biotechnologically Useful Enzymes by Partial Genome Sequencing: The Thermoalkaliphile <i>Anaerobranca gottschalkii</i>","year":2008,"lang":"en","type":"article","venue":"Microbial Physiology","topic":"Enzyme Production and Characterization","field":"Biochemistry, Genetics and Molecular Biology","cited_by":6,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of Calgary","funders":"Genome Alberta; Genome Canada; Deutsche Bundesstiftung Umwelt","keywords":"Gene; Pullulanase; Genome; Contig; Biology; DNA sequencing; Whole genome sequencing; Sequence assembly; Computational biology; Shotgun sequencing; Enzyme; Genetics; Biochemistry","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001278123,0.0002582748,0.0003090202,0.00006438939,0.000216766,0.00001858847,0.0006687664,0.0003462855,0.0001481828],"category_scores_gemma":[0.00005660926,0.0001988446,0.0001393202,0.0002380933,0.0003968056,0.00001396224,0.000336339,0.0001292211,0.00003406496],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00002218006,"about_ca_system_score_gemma":0.00008376421,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000008116759,"about_ca_topic_score_gemma":0.00001106651,"domain_scores_codex":[0.9983962,0.0001560249,0.0003758939,0.0006032441,0.00009679968,0.0003718077],"domain_scores_gemma":[0.9989685,0.00001039841,0.0002057203,0.0006022253,0.0001425513,0.00007053708],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001568142,0.00008650895,0.00002812897,0.00001251262,0.00006019278,0.000001217838,0.00006632124,0.0000946115,0.9870837,0.0001539553,0.01169587,0.000560107],"study_design_scores_gemma":[0.0002350674,0.0002357535,0.002752528,0.000003485,0.00001126922,0.00002350765,0.000006066586,0.000003760324,0.7204031,0.00001480147,0.2761329,0.0001777707],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9947336,0.001954709,0.0006215349,0.001750701,0.0002964819,0.0003730094,0.0001138928,0.00005023064,0.0001058109],"genre_scores_gemma":[0.9948713,0.001651509,0.0001498139,0.001703446,0.0005782162,0.00004652003,0.0004483058,0.00003385603,0.000516991],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.2666806,"threshold_uncertainty_score":0.8108646,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01966606491771329,"score_gpt":0.2242346346461233,"score_spread":0.20456856972841,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}