{"id":"W2059500309","doi":"10.5539/cco.v2n2p42","title":"HPV and methylation indicators in paired tumor and saliva in HNSCC","year":2013,"lang":"en","type":"article","venue":"Cancer and Clinical Oncology","topic":"Head and Neck Cancer Studies","field":"Medicine","cited_by":4,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"National Institutes of Health","keywords":"Saliva; Head and neck squamous-cell carcinoma; Methylation; Multiplex ligation-dependent probe amplification; Multiplex; DNA methylation; Cancer; Biology; Cancer research; Medicine; Head and neck cancer; Internal medicine; Gene; Gene expression; Bioinformatics; Genetics","routes":{"ca_aff":false,"ca_fund":false,"ca_venue":true,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0004265041,0.00008493217,0.0005684357,0.0001201334,0.00002468815,0.000004897916,0.00002013864,0.0001418238,0.0000963351],"category_scores_gemma":[0.0002629019,0.00006590223,0.00002178793,0.000164609,0.0002635127,0.00004943975,0.00004654937,0.0002560698,0.000002748517],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00007265561,"about_ca_system_score_gemma":0.0001549899,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000767451,"about_ca_topic_score_gemma":0.001765706,"domain_scores_codex":[0.9990135,0.00009825342,0.0004116032,0.0002544261,0.00005406233,0.0001681596],"domain_scores_gemma":[0.9991938,0.0005045319,0.00006838709,0.00006480389,0.00002062832,0.0001478785],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0001128215,0.00006752746,0.628327,0.0000304834,0.00001656499,0.00001405457,0.0003020917,5.234097e-8,0.00004975756,0.00004448473,0.0004374328,0.3705977],"study_design_scores_gemma":[0.004134398,0.0009656609,0.9807374,0.00005773352,0.00003327919,0.00000663243,0.0003019415,0.0000851414,0.00002655137,0.0003276432,0.01325165,0.00007199917],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9838169,0.006051962,0.000001445557,0.007333454,0.0001424342,0.0002872161,0.000001865003,0.00001001249,0.002354694],"genre_scores_gemma":[0.9882868,0.008573814,0.0001081273,0.002705338,0.0001224402,0.00008745584,0.00000137296,0.000006605917,0.0001080338],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.3705257,"threshold_uncertainty_score":0.2687415,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.06895334139421362,"score_gpt":0.4373276361933661,"score_spread":0.3683742947991525,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}