{"id":"W2059834347","doi":"10.1111/nph.13277","title":"Comparative interrogation of the developing xylem transcriptomes of two wood‐forming species: <i><scp>P</scp>opulus trichocarpa</i> and <i><scp>E</scp>ucalyptus grandis</i>","year":2015,"lang":"en","type":"article","venue":"New Phytologist","topic":"Plant Gene Expression Analysis","field":"Biochemistry, Genetics and Molecular Biology","cited_by":56,"is_retracted":false,"has_abstract":true,"ca_institutions":"University of British Columbia","funders":"National Research Foundation","keywords":"Xylem; Populus trichocarpa; Biology; Transcriptome; Botany; Gene; Gene family; Secondary cell wall; Phylogenetic tree; Orthologous Gene; Gene expression; Genetics; Genome","routes":{"ca_aff":true,"ca_fund":false,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002708149,0.0002628049,0.0005354357,0.00009984996,0.00008803789,0.00002744265,0.0004207331,0.0001634941,0.00000181661],"category_scores_gemma":[0.0003909094,0.0001949064,0.000191348,0.000405599,0.0003290168,0.00001772556,0.0001714158,0.0001569148,0.000002457839],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0000384166,"about_ca_system_score_gemma":0.0002623323,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000125448,"about_ca_topic_score_gemma":0.0004445848,"domain_scores_codex":[0.9983125,0.0001657089,0.0005218344,0.0003994752,0.0002999963,0.000300528],"domain_scores_gemma":[0.9986793,0.0001516525,0.0004550034,0.0003856753,0.0001843229,0.0001440279],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0000470758,0.00007876826,0.01038465,0.00005558734,0.0002408644,0.000002585526,0.003068887,0.0002416378,0.9244678,0.0002447031,0.06068827,0.00047918],"study_design_scores_gemma":[0.001791605,0.0001381301,0.002256097,0.00007381423,0.0001145055,0.00002306777,0.005641266,0.0001492053,0.9268177,0.0002693181,0.06264568,0.00007967037],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9814137,0.001855673,0.007299436,0.0001191417,0.0002788408,0.0002396464,0.0000716114,0.00001748763,0.008704484],"genre_scores_gemma":[0.9962527,0.0001873449,0.001612241,0.0002187393,0.0001140348,0.00001171091,0.0000881329,0.0000153536,0.0014998],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.01483896,"threshold_uncertainty_score":0.7948052,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03986711495221442,"score_gpt":0.2890005607558375,"score_spread":0.2491334458036231,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}