{"id":"W2060322845","doi":"10.1371/journal.pgen.0010001","title":"A Human-Curated Annotation of the Candida albicansGenome","year":2005,"lang":"en","type":"article","venue":"PLoS Genetics","topic":"Antifungal resistance and susceptibility","field":"Medicine","cited_by":338,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University; Royal Victoria Hospital; National Research Council Canada; Université de Montréal; Montreal Clinical Research Institute; Biotechnology Research Institute","funders":"National Institute of Dental and Craniofacial Research; National Research Council Canada; Canadian Institutes of Health Research; National Institutes of Health; Incyte; North Carolina State University; Massachusetts Institute of Technology; National Institute of Allergy and Infectious Diseases; Broad Institute; Wellcome Trust; University of California, San Francisco; Burroughs Wellcome Fund","keywords":"Biology; Candida albicans; Genome; Gene; Genetics; Gene prediction; Genome project; Computational biology; Comparative genomics; Open reading frame; Whole genome sequencing; Fungal protein; Genomics; Peptide sequence","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.001396429,0.002105261,0.001399255,0.006379613,0.002032635,0.001548688,0.001367121,0.0009976769,0.006952659],"category_scores_gemma":[0.003713772,0.0005055983,0.001369884,0.006938136,0.0003849968,0.0007342681,0.001730356,0.001631241,0.004402213],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001100617,"about_ca_system_score_gemma":0.005821014,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.01659252,"about_ca_topic_score_gemma":0.02915965,"domain_scores_codex":[0.9991072,0.0001498105,0.0001112853,0.0002363773,0.0002857039,0.0001095978],"domain_scores_gemma":[0.9981734,0.0002717433,0.0001283186,0.0003785227,0.0008171464,0.0002309617],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"design_other","study_design_gemma":"not_applicable","study_design_scores_codex":[0.001930996,0.0003559154,0.008657369,0.01132759,0.0004643405,0.003011327,0.00164846,0.004755159,0.2978274,0.004060675,0.1804714,0.4854893],"study_design_scores_gemma":[0.0002126637,0.0001932189,0.04492009,0.00155267,0.0009159361,0.003231814,0.0005926614,0.01026968,0.06551577,0.003969131,0.8683682,0.0002581022],"study_design_candidate":"not_applicable","study_design_consensus":null,"genre_codex":"dataset","genre_gemma":"dataset","genre_scores_codex":[0.09934848,0.03212494,0.1796511,0.003138932,0.002025182,0.001544265,0.632377,0.02420195,0.02558807],"genre_scores_gemma":[0.05679754,0.01000482,0.2656138,0.0006091816,0.0001555111,0.0004818196,0.6556801,0.002266806,0.008390551],"genre_candidate":"dataset","genre_consensus":"dataset","teacher_disagreement_score":0.01659252,"threshold_uncertainty_score":0.03299189,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.0295656820620381,"score_gpt":0.2921254702562381,"score_spread":0.2625597881942001,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}