{"id":"W2060382108","doi":"10.1371/journal.pone.0071577","title":"Diversity of Aplochiton Fishes (Galaxiidea) and the Taxonomic Resurrection of A. marinus","year":2013,"lang":"en","type":"article","venue":"PLoS ONE","topic":"Identification and Quantification in Food","field":"Biochemistry, Genetics and Molecular Biology","cited_by":28,"is_retracted":false,"has_abstract":true,"ca_institutions":"McGill University","funders":"Comisión Nacional de Investigación Científica y Tecnológica; Smithsonian Tropical Research Institute; International Development Research Centre; McGill University; National Geographic Society","keywords":"Biology; Evolutionary biology; Zoology; Context (archaeology); Species complex; Taxonomy (biology); Phylogeography; Genetic diversity; Cytochrome c oxidase subunit I; Systematics; Phylogenetics; Phylogenetic tree; Ecology; Population; Genetics","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0001335499,0.00003969007,0.00008397677,0.00001956762,0.00009311385,0.000006448102,0.00008885608,0.00004076285,0.00003063212],"category_scores_gemma":[0.00009191269,0.00003228101,0.00002837927,0.0000346951,0.0001554881,0.000003504043,0.0001419179,0.00002863272,0.000006410949],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.000002532204,"about_ca_system_score_gemma":0.000007905991,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.000168078,"about_ca_topic_score_gemma":0.00001214307,"domain_scores_codex":[0.9995912,0.00004631722,0.0001356933,0.0001060187,0.00007568188,0.00004503322],"domain_scores_gemma":[0.9995283,0.00001763383,0.0001194702,0.0002026764,0.0001162741,0.00001558597],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.0001103557,0.0002612137,0.03337834,0.00007167742,0.000164561,1.397171e-8,0.0001668644,0.000001815794,0.9624155,0.00153377,0.001395474,0.0005004621],"study_design_scores_gemma":[0.0004623308,0.00004654462,0.1250334,0.00001251362,0.00004315704,4.283236e-7,0.00009115444,0.00008707333,0.8738356,0.0001710117,0.0001690306,0.00004775947],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9976832,0.00009768486,0.00007793015,0.0002861648,0.00003490323,0.0001904584,0.000005621996,0.000003656225,0.001620439],"genre_scores_gemma":[0.9986606,0.000147773,0.0002219062,0.00002001518,0.00002493522,0.00001644171,0.00001667082,0.000003269772,0.0008883383],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.09165502,"threshold_uncertainty_score":0.1316381,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.03284423789325743,"score_gpt":0.1946209534217014,"score_spread":0.161776715528444,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}