{"id":"W2060480089","doi":"10.1186/1471-2164-10-180","title":"Bos taurus genome assembly","year":2009,"lang":"en","type":"article","venue":"BMC Genomics","topic":"Genome Rearrangement Algorithms","field":"Biochemistry, Genetics and Molecular Biology","cited_by":162,"is_retracted":false,"has_abstract":true,"ca_institutions":"","funders":"Norges Forskningsråd; Commonwealth Scientific and Industrial Research Organisation; AgResearch; Genome British Columbia; Robert J. Kleberg, Jr. and Helen C. Kleberg Foundation; National Human Genome Research Institute; Agricultural Research Service; Genome Canada; U.S. Department of Agriculture; Cooperative State Research, Education, and Extension Service; National Institutes of Health; U.S. Department of Health and Human Services","keywords":"Sequence assembly; Contig; Genome; Hybrid genome assembly; Biology; Reference genome; Computational biology; Genetics; Whole genome sequencing; Gene","routes":{"ca_aff":false,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":true},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0009617831,0.002091917,0.001014075,0.003527199,0.001752157,0.001861505,0.001219643,0.0009935962,0.02494014],"category_scores_gemma":[0.001178545,0.0005792809,0.001384846,0.002852309,0.0003269684,0.0008157954,0.0009961117,0.001388418,0.02613815],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.001105099,"about_ca_system_score_gemma":0.001002647,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.005591537,"about_ca_topic_score_gemma":0.005197325,"domain_scores_codex":[0.9992031,0.0001028746,0.00005796238,0.000369224,0.0001874172,0.0000793576],"domain_scores_gemma":[0.9994946,0.00007035944,0.00007591869,0.00009260691,0.0002154122,0.00005113952],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.001843842,0.0001958445,0.009624265,0.00407581,0.0004275288,0.00205238,0.0007976354,0.006469546,0.4011184,0.0108021,0.1860157,0.376577],"study_design_scores_gemma":[0.0001306604,0.000412313,0.03300107,0.0005360949,0.0004906905,0.002795925,0.0001608737,0.01119291,0.09387612,0.004878673,0.852392,0.0001326593],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"dataset","genre_gemma":"empirical","genre_scores_codex":[0.1185166,0.03725231,0.3097867,0.003006283,0.004829251,0.001625054,0.3774854,0.03991334,0.1075852],"genre_scores_gemma":[0.08133484,0.006903753,0.2261626,0.0007613174,0.000792859,0.0005909873,0.6466306,0.0039091,0.0329139],"genre_candidate":"empirical","genre_consensus":null,"teacher_disagreement_score":0.02494014,"threshold_uncertainty_score":0.08343303,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01463854184932328,"score_gpt":0.2395022810947722,"score_spread":0.2248637392454489,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}