{"id":"W2060599925","doi":"10.1016/j.virol.2007.12.002","title":"Characterization of 1706, a virulent phage from Lactococcus lactis with similarities to prophages from other Firmicutes","year":2008,"lang":"en","type":"article","venue":"Virology","topic":"Bacteriophages and microbial interactions","field":"Environmental Science","cited_by":82,"is_retracted":false,"has_abstract":false,"ca_institutions":"Université Laval","funders":"Natural Sciences and Engineering Research Council of Canada; Washington University School of Medicine in St. Louis; Fonds Québécois de la Recherche sur la Nature et les Technologies","keywords":"Biology; Siphoviridae; Prophage; Virulence; ORFS; Lactococcus lactis; Microbiology; Genetics; Bacteriophage; Genome; Pilin; Proteome; Phage display; Gene; Bacteria; Peptide sequence; Open reading frame; Pilus; Escherichia coli","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":false,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"metacan-v3-hybrid-931329e0061c","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.0002388674,0.0005863623,0.0004336697,0.0006286498,0.0002908375,0.0006672588,0.000324706,0.0005484719,0.0005519718],"category_scores_gemma":[0.0006516119,0.0001839817,0.0004438,0.0005755671,0.0003129349,0.0003552414,0.0003063412,0.0006802963,0.000506072],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0002128853,"about_ca_system_score_gemma":0.0003833516,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.001457284,"about_ca_topic_score_gemma":0.0007929727,"domain_scores_codex":[0.9998568,0.00001987469,0.00001296019,0.00002348035,0.0000570779,0.0000297434],"domain_scores_gemma":[0.9993955,0.0001706477,0.0001053249,0.00005270558,0.00009617372,0.0001797181],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"bench_or_experimental","study_design_scores_codex":[0.00009235709,0.00005476284,0.0008488737,0.00003163254,0.000004567552,0.0001332874,0.00005725276,0.00004868445,0.9975572,0.00004612571,0.00002440272,0.001100913],"study_design_scores_gemma":[0.0000506258,0.002313646,0.06409796,0.00003039926,0.0000817949,0.004641695,0.0006905675,0.001266114,0.9168795,0.0002319657,0.009670668,0.00004522877],"study_design_candidate":"bench_or_experimental","study_design_consensus":"bench_or_experimental","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9971675,0.000503458,0.001188318,0.00004944544,0.00002926864,0.00003099858,0.0004958654,0.00001688312,0.0005182675],"genre_scores_gemma":[0.9825853,0.0007560779,0.005934951,0.0001296771,0.00003982194,0.00004668211,0.006671913,0.0000455759,0.003789916],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.001457284,"threshold_uncertainty_score":0.002897561,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.01080541742021518,"score_gpt":0.204417385251675,"score_spread":0.1936119678314598,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}