{"id":"W2060646786","doi":"10.1128/iai.00628-09","title":"<i>Cryptococcus gattii</i>Isolates from the British Columbia Cryptococcosis Outbreak Induce Less Protective Inflammation in a Murine Model of Infection than<i>Cryptococcus neoformans</i>","year":2009,"lang":"en","type":"article","venue":"Infection and Immunity","topic":"Fungal Infections and Studies","field":"Medicine","cited_by":113,"is_retracted":false,"has_abstract":true,"ca_institutions":"Canada's Michael Smith Genome Sciences Centre; University of British Columbia","funders":"British Columbia Lung Association; University of British Columbia; Burroughs Wellcome Fund","keywords":"Cryptococcus gattii; Cryptococcosis; Cryptococcus neoformans; Biology; Outbreak; Microbiology; Virulence; Virology; Immune system; Pathogen; Cryptococcus; Genotype; Immunology; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":["metaepi_narrow"],"consensus_categories":[],"category_scores_codex":[0.0005403667,0.0002390466,0.0005070185,0.0001490599,0.0008891333,0.0003231499,0.00007027749,0.000243887,0.0000416195],"category_scores_gemma":[0.0002844243,0.0002514857,0.0001617657,0.0007339276,0.0001834421,0.0005299749,0.00009755865,0.0007998713,0.000006138872],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.0001712117,"about_ca_system_score_gemma":0.00009592505,"about_ca_topic_candidate":true,"about_ca_topic_consensus":true,"about_ca_topic_score_codex":0.2253375,"about_ca_topic_score_gemma":0.1160289,"domain_scores_codex":[0.99832,0.0002109914,0.000632995,0.0003064097,0.0002175807,0.0003120298],"domain_scores_gemma":[0.9986978,0.0001492248,0.0002844949,0.000364779,0.0004158863,0.00008779261],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"observational","study_design_gemma":"observational","study_design_scores_codex":[0.0003178899,0.000905016,0.8821089,0.0001350576,0.000198458,0.000003085019,0.002130645,0.0008032343,0.05257181,0.00007688565,0.0005989109,0.06015016],"study_design_scores_gemma":[0.002220637,0.0007581809,0.98335,0.0004675161,0.0001064376,0.00003494152,0.0002335901,0.004035711,0.005317099,0.002656581,0.0005655229,0.0002537921],"study_design_candidate":"observational","study_design_consensus":"observational","genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9934586,0.0001535214,0.001596109,0.0003377371,0.0001778065,0.002282636,0.00003511457,0.0001338069,0.001824714],"genre_scores_gemma":[0.9981845,0.0007876719,0.0001198359,0.0002140221,0.000126642,0.0004067057,0.00003953825,0.00002004555,0.0001010391],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.1093086,"threshold_uncertainty_score":0.9999937,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.02266077702662672,"score_gpt":0.2525912353651089,"score_spread":0.2299304583384821,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}