{"id":"W2060661289","doi":"10.4056/sigs.1974654","title":"Open resource metagenomics: a model for sharing metagenomic libraries","year":2011,"lang":"en","type":"article","venue":"Standards in Genomic Sciences","topic":"Genomics and Phylogenetic Studies","field":"Biochemistry, Genetics and Molecular Biology","cited_by":23,"is_retracted":false,"has_abstract":true,"ca_institutions":"Wilfrid Laurier University; University of Waterloo","funders":"Natural Sciences and Engineering Research Council of Canada","keywords":"Metagenomics; Library; Biology; Computational biology; Cosmid; World Wide Web; Pooling; Computer science; Genetics; DNA; Gene","routes":{"ca_aff":true,"ca_fund":true,"ca_venue":false,"about_ca":true,"invisible_to_affiliation_only":false},"retraction":null,"screen":null,"direct_labels":[],"prediction":{"model_version":"codex-gemma-dda1882f352a","candidate_categories":[],"consensus_categories":[],"category_scores_codex":[0.002004771,0.0002313248,0.0003177528,0.0001209285,0.0003688841,0.0002027498,0.001855974,0.00009157592,0.00002642608],"category_scores_gemma":[0.0001112351,0.0002133258,0.0001163557,0.0001451027,0.0004263279,0.000008921756,0.001447721,0.0000655125,0.000001933556],"about_ca_system_candidate":false,"about_ca_system_consensus":false,"about_ca_system_score_codex":0.00005986917,"about_ca_system_score_gemma":0.0005674897,"about_ca_topic_candidate":false,"about_ca_topic_consensus":false,"about_ca_topic_score_codex":0.00008451686,"about_ca_topic_score_gemma":0.0002718174,"domain_scores_codex":[0.9980841,0.00003759437,0.0003874651,0.0008398063,0.0001580024,0.0004929928],"domain_scores_gemma":[0.9992486,0.00002415867,0.0001383134,0.0004390667,0.00006741825,0.00008243877],"domain_codex":null,"domain_gemma":null,"domain_candidate":null,"domain_consensus":null,"study_design_codex":"bench_or_experimental","study_design_gemma":"not_applicable","study_design_scores_codex":[0.002414275,0.0003229626,0.0361965,0.0001188558,0.0007384623,0.000008823545,0.01886255,0.02729839,0.8271557,0.06692062,0.006440493,0.0135224],"study_design_scores_gemma":[0.009092214,0.003672868,0.0185648,0.0001126498,0.0003642203,0.000046364,0.01153349,0.0771122,0.2814701,0.2547286,0.3390129,0.004289594],"study_design_candidate":"bench_or_experimental","study_design_consensus":null,"genre_codex":"empirical","genre_gemma":"empirical","genre_scores_codex":[0.9606155,0.004388067,0.006746736,0.0000733788,0.0001772426,0.0008598379,0.0004285933,0.000006974121,0.02670369],"genre_scores_gemma":[0.9406363,0.0002625558,0.05758313,0.0002910569,0.00009334186,0.0001439472,0.00001163705,0.00003294206,0.0009451087],"genre_candidate":"empirical","genre_consensus":"empirical","teacher_disagreement_score":0.5456856,"threshold_uncertainty_score":0.8699175,"prediction_status":"machine_predicted_unvalidated"},"machine_scores":{"provisional":true,"baseline":true,"maturity_gate_passed":false,"score_opus":0.09049842001173353,"score_gpt":0.3201111866777454,"score_spread":0.2296127666660118,"validation_status":"score_only:v0-immature-baseline","note":"Baseline scores from an immature model (maturity gate not passed). Scores rank; they never assert a category."}}